Gene Dbac_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1960 
Symbol 
ID8377633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2254159 
End bp2255355 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content57% 
IMG OID645001185 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003158464 
Protein GI256829736 
COG category[C] Energy production and conversion 
COG ID[COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.712418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAT TACGCCTGAA CACCTCGGTC GAAATCAAGG ACGTTTTGCA GAACGTGCCG 
ACGCCCACGT TGGTACGGAT TCCGATTCAG AAAAAACACA AACCCATCGT CAAGAAGAAA
CAAATCGTGG GCCGCGGCCA AGTCGTCGCG GAAAATCCTT CGACGAGCGC TTACGGCATC
GGCTTTGTCC ATTCCTCCAT CGACGGCATT GTTGAAGATG TGCTTCCCGA CGCCATCGTC
GTCGGTCCCA TCCCCGCACC CAAAGAGGGT GAAGAGGCTG TGGTTCCCGC TCGGCCGGAA
CCCTGCGCGG AGCTGGACTC GCTCGCCAAC GAAGAACTTT GCCGCAAGCT GCTGGAACTT
GGCATCGACA CGAGCAGGTT CCATGCCTCA CGTGCATTGA TCATTAACGG TCTCAATCCC
GAGCCCGGCG TGCTGGTCAG CGAACAGCTG GTTAGGGATG CCCAGGATAC CTTGAAGGCC
GGTCTGCAGA TTCTGGAACG CGCCATCAAG CCCGGAACGG TGAAGCTGGT TGTTGCCAGC
GGCAAGCAGA TCTCATTACA CGGGTGCACC ACCGTCAACG CCAGCGACGT TTATCCGGCC
ACCATCGATC CTTTGGTCGT TCATGCGGCG ACCGGATCAG AAAGACCTGA CAACGTCGAT
GTCATTTCCA TTTCCGCGCT CTACAGAGTC GGTCTTGTGG CGACCACCAA GCTTCCCCTC
ATGGAAGCCG CGGTCACTGT CGGCGGGAAG GTGTATCGGG TGCCCACCGG CATGCCGGTG
CAGGACTTGT TGAATGCCGC GGGCGTCGAG CAAGGCCCGG AATGGAAGCT GGCTCTGAAT
GGTCCCATGC GCGGTGAGGC GTTGAGCGAT CTGAGCGTGG GCATACCGGA AAACTGCACT
GCCGTGACTC TGGTTCGGGA TGGCCTCTAT CCTTCTGTTC AGCCCAATCC CTGTATCAAC
TGCGGCGAGT GCGTCCTGGT TTGTCCGGCT CGCATTCAAC CAGGAATGAT TTCCCGGTAT
GCCGAATTCA ATATCTTTGA AAGTACCCGC TCACAGCATG TCGAAGCCTG CCTTGAATGC
GGCATGTGTA CTTTCGTGTG TCCGGCCAAT CGTCCGGTTA TGCAGTACCT GCTTCTGGCC
AAGAAGCAGC TGACTGCCCA GGACGAAGCA GTGTCTACAT GCAGATTGCA GGACTGA
 
Protein sequence
MMKLRLNTSV EIKDVLQNVP TPTLVRIPIQ KKHKPIVKKK QIVGRGQVVA ENPSTSAYGI 
GFVHSSIDGI VEDVLPDAIV VGPIPAPKEG EEAVVPARPE PCAELDSLAN EELCRKLLEL
GIDTSRFHAS RALIINGLNP EPGVLVSEQL VRDAQDTLKA GLQILERAIK PGTVKLVVAS
GKQISLHGCT TVNASDVYPA TIDPLVVHAA TGSERPDNVD VISISALYRV GLVATTKLPL
MEAAVTVGGK VYRVPTGMPV QDLLNAAGVE QGPEWKLALN GPMRGEALSD LSVGIPENCT
AVTLVRDGLY PSVQPNPCIN CGECVLVCPA RIQPGMISRY AEFNIFESTR SQHVEACLEC
GMCTFVCPAN RPVMQYLLLA KKQLTAQDEA VSTCRLQD