Gene Dbac_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1920 
Symbol 
ID8377592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2213168 
End bp2214349 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content60% 
IMG OID645001147 
Productbeta-lactamase domain protein 
Protein accessionYP_003158426 
Protein GI256829698 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATACGA AGAAAATAAA AGACGGCGTC TTCTGGATGG GTGCGGTGGA TTGGGACAGG 
CGGCTGTTCG ACTCCCTGGT TCCGCTCCCC GACGGGACGA CCTACAACGC CTACCTCGTG
GAAGGCAGCG AGAAGACCGC GCTCATCGAC GCCGTGGACC CCGACATGGT CGACACCCTG
CTTGGGCACC TGGATGGAGT GGAAAAACTC GACTATGTCA TTTGCCAGCA TGCCGAGCAG
GATCATTCCG GAACAATAGC CCTGGTACTG GACCTGTACC CCGAGGCCAA GGTCGTCACC
AACGCCAAGG CCAAGTCCAT GCTCATGGAT CTTTTGCTCA TCCCCGATGA CAAATTCATC
GTTGTCGCAG ACGGCGAAAC CCTCTCCCTT GGCGACAAGA CGCTGACCTT CATTCTCACG
CCCTGGGTGC ACTGGCCGGA AACCATGTCC ACCTATCTTG CTGAGGACAA GATCCTGTTC
AGTTGCGACT TTTTCGGTTC GCACATCGCC ACGAGCGACC TTTTCGTGCG CGACCAGGGC
CGGGTGCATG AAGCCGCCAA GCGCTATTTC GGCGAGATCA TGATGCCGTT TCGGGCCATC
ATCGCCAAAA ACCTCGAAAA ACTCGGCCCC TACGACATCG CCATGATCGC CCCCAGCCAC
GGCCAGATCT ACGACAGTCC CGGCTGGATC GTGGACGCCT ACAAGGATTG GGTTTCGGGC
ACGGCGCACA ATCTGGTGGC CTTACCCTTT GTCTCCATGC ACGGCAGCAC CCGGCTCATG
GTCGATCACC TGGCGGCGGC CCTGTCCGAG CGCGAGGTGC GGGTGGAGCT TTTCAATCTC
ACCGTGACCG ACATCGGCAA GCTGGCCATG TCCCTGGTGG ATGCGGGCAC CATCGTGCTC
GGCACCCCCA CAGTGCTTGC CGGTCCGCAT CCCATGGCCG CCTACGCGGC ATTTTTGGCC
AATGCCCTGC GTCCCAAGGC CAAATACCTG TCCATCATCG GCTCCTACGG ATGGGGCGGC
AAGACGGTGG AGACCCTGGC TGGCATGATT CCCAATCTGA AGGTCGAGGT GCTGGAGCCT
GTGCTGTGCA AGGGCTTGCC GACGGACGAT ACCTACGGCG CCCTGGATCG TCTGGCGGAT
GCCATTGCCG CCAAGCACAA GGAGAGCGGC TTTCAAGGGT AG
 
Protein sequence
MHTKKIKDGV FWMGAVDWDR RLFDSLVPLP DGTTYNAYLV EGSEKTALID AVDPDMVDTL 
LGHLDGVEKL DYVICQHAEQ DHSGTIALVL DLYPEAKVVT NAKAKSMLMD LLLIPDDKFI
VVADGETLSL GDKTLTFILT PWVHWPETMS TYLAEDKILF SCDFFGSHIA TSDLFVRDQG
RVHEAAKRYF GEIMMPFRAI IAKNLEKLGP YDIAMIAPSH GQIYDSPGWI VDAYKDWVSG
TAHNLVALPF VSMHGSTRLM VDHLAAALSE REVRVELFNL TVTDIGKLAM SLVDAGTIVL
GTPTVLAGPH PMAAYAAFLA NALRPKAKYL SIIGSYGWGG KTVETLAGMI PNLKVEVLEP
VLCKGLPTDD TYGALDRLAD AIAAKHKESG FQG