| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1914 |
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| Symbol | |
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| ID | 8377586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2202243 |
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| End bp | 2203838 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645001141 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003158420 |
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| Protein GI | 256829692 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000272629 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGATA TACGACGGAC GTTGGGCGGC AGGGCGTTTC GGCTCGCGAT TTTCAGCCTT
GCTTTGGCCG TCATCGCCGG TTGCGCCGTG GGGCCGGACT ACGTGCGGCC CCAGGCTCCG
CAGATGCAGG AGTGGCTTGA AAAAGATGAC GCGGGGCTGA AGCACGGTCC GGCCGAGCTT
GCGGCCTGGT GGAAGCGTCT GAATGACCCC GTTCTGGACC GCCTGGTCGC GCTGGCCGCC
GAGCGCAACC CGTCCCTGCA TGTGGCGGCC TTGCGTATCC TGGAGTCGCG GGCCCGGCTC
GGCATCGCCA CCGGGAACCA GTTCCCGCAG TTGCAGCAGC TTCAAGGCAG TGTTTCCGAC
ACGGGCCTGA GCAGGCACAA CGCCAACACC ACGCCGGCCA TCGACAGGTA TTACGCCACG
GCCTCCGTGG CCCTGGACGC GGCCTGGGAG CTGGATTTCT GGGGCAGGTT CCGGCGGGCC
GTGGAATCCG GGGCGTGGAG CGTGGACGCG GCCATGGCCG GATACGACGA CCTGCTGGTC
ACGCTCACGG CGGAGGTGGC GCGGGTCTAC GTGACCCTGC GCACCCTGGA GCAGAGGCTC
TTCATTGCGC ATGAAAACGT GGCGTTGCAG GAGCGGTCCC TGCAGATCGC CCGGGTGCTG
CACCAGGGCG GGGACGTGAC CGAACTGGAT GTGACCCAGG CTGCAGCGCT GCTGGCTGGG
ACGCAGGCCT CCATCCCGCG CCTTGAGGCG CAGCTGCGGC AGTCCAAGAA CGGGCTCTCG
GCCCTGCTCG GGATGCTGCC CGGCGAAGCG GACCGGATTC TCGGCGGGCC GGGACCTGTT
CCGCAAGTGC CGTCCGAGGT GGCCGTGGGG GTTCCCGCCG AGCTGCTCCG GCGGCGGCCG
GACATTCGCC TCGCCGAGGC GCAGATGGCC GCCCAGTGCG CCCTGATCGG GGTGGCCCAA
GCGGACCTCT ATCCGCGCTT TTCGCTTTTC GGCACCATCG GCCTCTCGGC CAGCAACGCG
GCCCTGACCT TTGCCGGGTA TCCGGGGGGG AGCAGCCTGG GCGACCTTTG GAGCGGTGAG
AGCCTGCAGT ATTCAGGCGG CTTGGGTTTT GGCTGGGACA TCTTCAATTA TGGGCGCATC
ACGAACAATG TGCGCGTTCA GGATGCCCGT TTCCAGCAGC TTGTGGAACA GTACAAGAAC
ATAGTACTGA CCGCGGCCCG CGAGACCGAG GACGCCTTGA CCGCCTTTTC GCGCTCCCGT
GAGGAAGTGG CGTTTCTGGA GCAGGGGGTG GCCGCCGCCA CGCGCTCGGT GGAAATTTCC
ATGATCCAGT ACCGCGAGGG CCTGGCCGAT TTTCAGCGCG TCCTGGACAC GCAGCGCTCC
AAAGTCCAGG TTCAGGATCA GCTGACCGCC ACGCAGGGCT CGGTGCTTAC CAATCTGATC
GCTACGTACA AGGCCCTTGG CGGCGGCTGG GAATTCAGGT TCGGCAAGGA TTTTCTGCCG
CAAGAGATCC TGCGGGAAAT GAGCGGGCGC ACGGACTGGG GCGCGTTGCT GGAGTCGTCC
GTTTCAGGCG AGACAGATGG CGGCTCGCGA GAATAA
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| Protein sequence | MKDIRRTLGG RAFRLAIFSL ALAVIAGCAV GPDYVRPQAP QMQEWLEKDD AGLKHGPAEL
AAWWKRLNDP VLDRLVALAA ERNPSLHVAA LRILESRARL GIATGNQFPQ LQQLQGSVSD
TGLSRHNANT TPAIDRYYAT ASVALDAAWE LDFWGRFRRA VESGAWSVDA AMAGYDDLLV
TLTAEVARVY VTLRTLEQRL FIAHENVALQ ERSLQIARVL HQGGDVTELD VTQAAALLAG
TQASIPRLEA QLRQSKNGLS ALLGMLPGEA DRILGGPGPV PQVPSEVAVG VPAELLRRRP
DIRLAEAQMA AQCALIGVAQ ADLYPRFSLF GTIGLSASNA ALTFAGYPGG SSLGDLWSGE
SLQYSGGLGF GWDIFNYGRI TNNVRVQDAR FQQLVEQYKN IVLTAARETE DALTAFSRSR
EEVAFLEQGV AAATRSVEIS MIQYREGLAD FQRVLDTQRS KVQVQDQLTA TQGSVLTNLI
ATYKALGGGW EFRFGKDFLP QEILREMSGR TDWGALLESS VSGETDGGSR E
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