Gene Dbac_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1889 
Symbol 
ID8377561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2182450 
End bp2182944 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content60% 
IMG OID645001117 
Productprotein of unknown function UPF0066 
Protein accessionYP_003158396 
Protein GI256829668 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATA TCCGCATCCG TCCCATCGGC GTCATCAATT CACCCTACAC CGACAGGGCC 
AACATGCCCA TCCAACCGTG CGGCGCGCGC GATGTGGCCG GCCGGATCGT GATAGAGGAA
GCCCTGGCCC CCGGCCTCAA GGATCTTGAA GGATTTTCCC ACATCTATCT GCTCTACCAC
TTCCACATGA GCACGGGGTT CGATTTAACC GTCGTCCCAT TCATGGAACC GGCCGAGCGC
GGGCTCTTTT CCACCCGCGC TCCCAGGCGC CCCAACCAGA TCGGCCTGTC CATCGTGAGA
CTGGAGCGCA TCGAAGGCAA TACCCTGCAC ATCCTGGATG TGGATGTTCT GGATGGCACT
CCGCTCCTGG ACATCAAACC CTACTTCAAA ACCTTCGACG CCTTCCCCGA AGCCATCTCC
GGCTGGGCCG AAGCGCATCA GAACAAGGCA GGCCAGGTCC GCTCCGATAC ACGCTTTGTC
AGCCCCAAGA CGTAA
 
Protein sequence
MDDIRIRPIG VINSPYTDRA NMPIQPCGAR DVAGRIVIEE ALAPGLKDLE GFSHIYLLYH 
FHMSTGFDLT VVPFMEPAER GLFSTRAPRR PNQIGLSIVR LERIEGNTLH ILDVDVLDGT
PLLDIKPYFK TFDAFPEAIS GWAEAHQNKA GQVRSDTRFV SPKT