Gene Dbac_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1885 
Symbol 
ID8377557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2173155 
End bp2174504 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content58% 
IMG OID645001113 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003158392 
Protein GI256829664 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.927345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACCC GAAAATTCGA CGTCATCGTC CTGGGCTCCG GAGTCGCCGG AGGCCATGTT 
GCCACACGCT GCCACAAGGC CGGACTGAGC GTGGCGCTGG TGGAAAGCCA CGGTTTCGGG
GGCACCTGCC CTCTGCATGG TTGCGAACCC AAGAAAGTGA TGGCCGATGC CGCAGAGACT
GTGGAACGCT TCAACAATGC CTCCGGATCA GGCCCGGTCG GCTCCGCCAA GCTCGACTGG
GTGGAACTCA TGCGCTTCAA ACGCACCTTC ACGGACGACT TGCCGGACAA AATCCAAAAA
CACTACGAAA AGCTAGGCAT CCACACATTC ACTGCGGCCG GAATCTTTGC CGGACCAAAC
ACCATCGTCA GCGGAAATTC ACGGCTTGAA GCCTCCCATA TCTGCATTGC AACCGGCTCA
ACTCCCAGGG AGTTGCACAT CCCGGGCAGC AGTCTGCTGT CTTCCAGCAA CGATTTCTTG
GCCATGCCAA CCCTGCCGGA GAGGATCGCC TTCATCGGAG GCGGATTCAT AGCCTTTGAA
ATGGCCCACA TTGCGGCAGC GGCCGGTGCG CACGTAACGA TTGTTCATCG CAGCCAGCGG
TTTCTCAAAA AGTTTGACGC CGACCTGGTG AAGCGACTGG CTGAACATCT GGAAAAAATG
GGGGTGAAAT TTTATCAGAA CTGTCCACCC CACTCCATCG AAAAGGATGG CAGCGCGTTG
GTATTGAAAG CCGGAGAAGA CGGCAGCCAA AGCTTTGCGG CGGACGCAAT CTTCAACGCG
GCCGGGCGTA TCCCAAACCT GGCGGACCTT GACCTGCCCA CCGGCAACAT CGACACGCAC
AAAGGAGGAG TCGCCGTCAA CGCCTGCATG CAGAGTCTCT CCAACCCTAG CGTATTCGCT
GCCGGAGACG TCATCGCCGA AACCATGCCC CTCACTCCCG TGGCCAGCGT GGAGGCGGAA
GTCGTGGCCA AAAACATCAT CGAAGGCCCA ATACACGAAA TCAGCAAGGA CGTGACGCCA
TTCGCCCTGT TCACCTACCC GCCGCTGGCA GGCGTGGGCA TGCTCGAAGA AGAGGCGCAC
GAGCAGGGCT TAGGATTTGA TGTCATCCAT GGAGATTCGG CAGGGTGGTC GGAATACCAG
CGCATCGGGC AGCAGTGCGC GGGATTCAAG CTGCTGGTCG ATAAAGAGAC GCGCCAACTC
CTCGGGGCGC ACGTTTTGGG TGACGCGGCA GAGGAAACGA TCAACCTATT CGCACTGGCC
ATGCGCAAGA AGGTCGATGT GGACGAATTG CGATCCATGT TGTGGGCATA CCCGTCTTTT
GGGTACGCAA TCAAATACAT GTTCAGATAA
 
Protein sequence
MKTRKFDVIV LGSGVAGGHV ATRCHKAGLS VALVESHGFG GTCPLHGCEP KKVMADAAET 
VERFNNASGS GPVGSAKLDW VELMRFKRTF TDDLPDKIQK HYEKLGIHTF TAAGIFAGPN
TIVSGNSRLE ASHICIATGS TPRELHIPGS SLLSSSNDFL AMPTLPERIA FIGGGFIAFE
MAHIAAAAGA HVTIVHRSQR FLKKFDADLV KRLAEHLEKM GVKFYQNCPP HSIEKDGSAL
VLKAGEDGSQ SFAADAIFNA AGRIPNLADL DLPTGNIDTH KGGVAVNACM QSLSNPSVFA
AGDVIAETMP LTPVASVEAE VVAKNIIEGP IHEISKDVTP FALFTYPPLA GVGMLEEEAH
EQGLGFDVIH GDSAGWSEYQ RIGQQCAGFK LLVDKETRQL LGAHVLGDAA EETINLFALA
MRKKVDVDEL RSMLWAYPSF GYAIKYMFR