| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1882 |
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| Symbol | |
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| ID | 8377554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2169673 |
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| End bp | 2170965 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645001110 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_003158389 |
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| Protein GI | 256829661 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGG ATGACATGAC CAGGCGCAGC AGGATTACGC ACAACCTCCT GCTCATCGTC
ATCGCCATGT TCTTCACGGC AGCCATTGCC TGGGCGGCCC ACGCTCCTCT GGACGAAGTG
GTGCGAGGCA TGGGCAAGAT CATCCCTTCC ACGGAAATCA AGCGCATCCA GAATTTCGAA
GGCGGCATCG TCAAGGAAAT CCTGGTGCGC GAAGGCGAAG AGGTGACCAA GAACCAGCCG
CTGATCCTTC TTGATCAGAC GCAGATGACA TCGCGGTTTC GTGAGCAGCA ATCAAACTAT
CTCGATCAGA CCCTGGCCAT CGCCCGCCTG GAAGCGGAGC TGGCAGGGAA GGACACCATA
GTTTTCCCGG CCGAAGTGCA GGACCAAAAG CCGCATCTGC TCAAAAACCA AACCGAGCTT
CTGCGCTCTC GCGCCGCCAA TCGGCAGGCC GCCCTGTCCG TTCTTGAATT CGACAGGCAG
CAGCGTCTGC AGGAACTCAA AGAGCTCAAG AGCAGGCTGA GCTATCTGCA GAGCAACCAT
GCGCTCCTGA AAAAGGAAGT AGACATGACC CGGGCCATGG TTTCCAAGGG GGCCGCGTCG
GAAATGGATC TTTTGCGCTC CCAGCGCCAG CTGATGGAAC TCGCGGGACA GATCGCCGAT
GCGCGTATCG CCATTCCCAA AGTGAACGCC ACCCTTGAAG CGGCCGCGCA CCGCATCGAG
GAAGGAGAAA GCAACCATCG CACGGAAATA CTGCAGGAGC TCAATACGAT TCGCACGGAA
ATGGAAGGCC GCAAGGAAAC ACTTCCGGCC CTTGAAGACC AGGTGAACCG CACCACCGTC
CGCTCTCCTG TTGACGGCAC CGTGCAGCGG GTCTTCGTGA CGACCATTGG CGAGGCTGTC
GCACCAGGCA TGGAGATGCT TGAAATCGTG CCCAGGGAAG ACACCCTCCT GGTCGAGGCG
AAAGTGGTCC CGGAGGACAT CGCCTTTCTG CATCCCGGGC AAAATGCGGA TGTCAAGATC
ACTGCCTACG ATTTTTCCAT CTATGGAAGC ATGACGGGAA AAGTGGAACA TATCAGTGCC
GACGCCATCA CCGACGAACA GAAAAAACTC AGCTACTACC TCATCAAGGT CCGCACCGAT
AGCGCGTCAC TGACAAGCAA GAATGGCAAG GAACTCCCCA TCATCCCGGG CATGGTGGCT
CAAGTGGATG TGTTGACCGG CAAGAAAACC GTGCTTGAAT ACATTGTTAA CCCCATCATC
AAGACTGCCC GAGGCGCCTT GCGTGAACGG TAG
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| Protein sequence | MELDDMTRRS RITHNLLLIV IAMFFTAAIA WAAHAPLDEV VRGMGKIIPS TEIKRIQNFE
GGIVKEILVR EGEEVTKNQP LILLDQTQMT SRFREQQSNY LDQTLAIARL EAELAGKDTI
VFPAEVQDQK PHLLKNQTEL LRSRAANRQA ALSVLEFDRQ QRLQELKELK SRLSYLQSNH
ALLKKEVDMT RAMVSKGAAS EMDLLRSQRQ LMELAGQIAD ARIAIPKVNA TLEAAAHRIE
EGESNHRTEI LQELNTIRTE MEGRKETLPA LEDQVNRTTV RSPVDGTVQR VFVTTIGEAV
APGMEMLEIV PREDTLLVEA KVVPEDIAFL HPGQNADVKI TAYDFSIYGS MTGKVEHISA
DAITDEQKKL SYYLIKVRTD SASLTSKNGK ELPIIPGMVA QVDVLTGKKT VLEYIVNPII
KTARGALRER
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