| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1881 |
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| Symbol | |
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| ID | 8377553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2167313 |
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| End bp | 2169526 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645001109 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_003158388 |
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| Protein GI | 256829660 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family
[TIGR01846] type I secretion system ABC transporter, HlyB family
[TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCAGG AGTCGCAAAC AACCAACGGC GGAACTATCC AACCCGTCGT CTCGGAACGA
ACGGAAAGCC AGGCAACGAC CGACGCGCTT TCCGGGTGCC TTCTCTTTGT CGCCAAACAT
CACGGCCGCG TCCTTTCGCC CGCGTCCCTC CTGTCCGGCC TGCCTCTCGA CGCGCAGGGG
CGGCTGACTC CCGGCCAGGT CGAAGCGGCC GCCCGCAACG CCGGCATGTC TGCCCGCATC
GTCAGGAGTC CTCTGTCACA GGTCGCGCGC TTCGCCCTGC CGGCCGTGCT CTTTCTTGAA
GACGACCAGG CCTGCGTACT CGTGGAGATG GACGGCGAGA AACTGACCGT CGCCCATCCG
GCCCTCGAAG AAGGCGTCAA GGTCATGCCC CGCAAGGAAC TTGAAAAGCT CCACGCGGGC
CACGTCCTCT ACCTCCTGCC CATCAGGGAG GAGTCTGCGC ACCAACGCCC TTCTCTCAAA
ACCAAAGGGC ATTGGTTGTT GAGCGCCCTG CTCAAAAACT GGCGCTCGTA CTCCCAGGTC
ATTATCGCGG CGGCCATTCT GAACATCCTG GCCCTGGCCT CGCCACTCTT CGTCATGAAC
GTCTACGACC GGGTAGTGCC CAACAACGCC CTGGAAACCC TCTGGGTGCT GGCCATCGGC
ATGGCCGTTG TCTTTGTTTT CGACTTCGCC ATCAAAAGCC TGCGCGCCTA CTTCATCGAC
AACACCGGCA AGAAGATCGA CGTTGAACTG GAGGGCAGAC TCTTCGACCA GCTCCTGAAC
ATGCACCTCA AGGACAAGCC CGCCTCGGTG GGCTCTTTCG CCAACCTCCT GCGCGAACTG
GAAGTCCTGC GGGATTTCTT CACCTCGGCC ACGCTGGTGA GCTTCGTGGA CCTGCCCTTC
ATTCTGCTCT TCATCGCCAT GTTCTGGTAC ATCGGCGGCC CCATCGCCTT CGTTTTCATG
GCCGTCCTGC CCATCACGAT CCTCATCGGC CTGGCCATCC ACGTGCCCAT AAAAAACTCC
GTCGAGGGCG CCATGGCCAA AGGCAACGGC AAGCACGGAG TGCTCGTGGA GACTTTGAGC
AACATCGAAA CGGTCAAGGG CCTGGGCTGC GAGGCGACCA TGCGCCAGCG TTGGATGCGC
GACACGGCCG ACAGCGCCAG GCACGCGATC CGCTTACGCT CCCTGTCCCA CCTGGCCATG
AACTTGACGG GATTCGTGCA ACAGTTCGCC TACGTGGTCA TCATCATTGT CGGCGTCTAC
CTGATCAAAG ACGGCACGCT GACAACGGGC GGGCTGGTGG CCTGCTCCAT CCTGAGCGGC
AGGGTCATGG CCCCCTTCGC CCAGATTGCC CAGCTCCTCA CGCGTCTGCA CCATACCATG
AACGCCTACT CGGAGTTGGA CAAGGTCATG AGCCTGTCGG TCGAACGCAC GGATACGCAC
TCTTTTCTGC ATAGGCCGCA ATTGGCGGGA AACATTGAAT TCCGCGACGT CACCTTCTCC
TACCCTGGTT CAAAACTCCC TGCCCTCAAG GGGTTGAACC TGCGCATCGC AGCCGGCGAA
CGCGTGGGCA TCGTGGGGCG GACCGGTTCG GGCAAGTCAA CACTGGGGAA ACTGATATTG
AGTCTTTACA CCCCTGATCA GGGCTCGGTG CTGGTGGATG GAGCGGACCT GCGCCAGGTC
GACCCGGCGG ATCTGCGTCG CTGGACCGGA TACATGCCCC AGGATGTGGC GCTGTTCCAG
GGTACGGTTA GGCAGAACAT CTGCATGGCG CATCCCCAGG CTTCGGACCA GGAAATCCTG
CAAGCCGCTC AGATATCGGG CACCCACGAC TTCATGCGCA CCAACCCCCA GGGCTACGCC
CTGCACGTAG GGGAACGCGG CGGCACCCTT TCCGGAGGCC AGCGCCAGGC CATCTCCATC
GCCAGAGCGC TGCTGCGCAA CCCGCGCATC CTGGTCATGG ACGAACCCTC CAGCTCCATG
GACTCCCAGT CCGAGGCGCT GCTGCTGCAA CGCCTCAAAT TATTTCTGGA CGGAAGGACG
CTGGTGCTGA TCACCCATCG TCCCTCTCTC CTTGAACTGG TGAACCGTCT GGTTGTCATT
GACGACGGCC GGGTGGTGGC GGACGGGCCC AAGGACGTGA TCGTGCGGCA ACTGCAGTCC
GGAGGAATTC CCGTCAATCA AGACATGCAG CAGCAACCGG GGGCCAAACA ATGA
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| Protein sequence | MLQESQTTNG GTIQPVVSER TESQATTDAL SGCLLFVAKH HGRVLSPASL LSGLPLDAQG
RLTPGQVEAA ARNAGMSARI VRSPLSQVAR FALPAVLFLE DDQACVLVEM DGEKLTVAHP
ALEEGVKVMP RKELEKLHAG HVLYLLPIRE ESAHQRPSLK TKGHWLLSAL LKNWRSYSQV
IIAAAILNIL ALASPLFVMN VYDRVVPNNA LETLWVLAIG MAVVFVFDFA IKSLRAYFID
NTGKKIDVEL EGRLFDQLLN MHLKDKPASV GSFANLLREL EVLRDFFTSA TLVSFVDLPF
ILLFIAMFWY IGGPIAFVFM AVLPITILIG LAIHVPIKNS VEGAMAKGNG KHGVLVETLS
NIETVKGLGC EATMRQRWMR DTADSARHAI RLRSLSHLAM NLTGFVQQFA YVVIIIVGVY
LIKDGTLTTG GLVACSILSG RVMAPFAQIA QLLTRLHHTM NAYSELDKVM SLSVERTDTH
SFLHRPQLAG NIEFRDVTFS YPGSKLPALK GLNLRIAAGE RVGIVGRTGS GKSTLGKLIL
SLYTPDQGSV LVDGADLRQV DPADLRRWTG YMPQDVALFQ GTVRQNICMA HPQASDQEIL
QAAQISGTHD FMRTNPQGYA LHVGERGGTL SGGQRQAISI ARALLRNPRI LVMDEPSSSM
DSQSEALLLQ RLKLFLDGRT LVLITHRPSL LELVNRLVVI DDGRVVADGP KDVIVRQLQS
GGIPVNQDMQ QQPGAKQ
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