| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1875 |
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| Symbol | |
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| ID | 8377547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2136287 |
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| End bp | 2137717 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645001103 |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_003158382 |
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| Protein GI | 256829654 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATGGA GAGCAGTTAG GAATACGTTG ATTTTTTTGT TCATGATAAT GCTTGTGATA
TGCGTCTCGC CGGCCCTGGT CCGGGCGAAG GATGGAGCGG GAGACGGTGT TGGCGCGGTT
CCTGCTGTTT CCGGAGCCAA GAATGTAAAT TCCATATTGA ACAAGGCCAC TGCGGAAAAC
GGGGTTTCGC TTCAGGCGGC CCTTCAGTCC GCCATGGACA CCAATCCAAC CTTTCTGAGT
CGCAAACATG CGTATTCTTC CTCGCACGAA GCGTATCTGA AATCGTTCGG CGCCTTGCTG
CCGCAGGTCA ATGTCGTTGC CAGGGGTGGG TATCAGGTCA TTCAGAACGA TACGACCAGC
TTCCTCTATG ACGACAAGCA GGGTGAGGGC TGGACCAATG ATATGAGGGT AGTCATGTCC
CAGTTGCTTT TCGACGGCGG TATGACCAGT TCCAAGGTGG AAGCGGACAA GCTCCATTCG
CAGTCCAAGC AGGAAGAGCT TTTCAACACG GCCGAGGACG TCGGACTGAC CGCGACACAG
TATTTCATGG AAGTCATTCG CAATCGGGCC CTGATCGAAT TGTGTGAAAA CAATATCGTC
GAGCATGAAA AAATCCTTGA GCTTACCCGC ATTCGATTGA ACAACGGTGG CGGAACACAG
GTCGACGTAA ACCAGGCCGA AGCTTCTCTT GAAGAAGCGA AATCACGGTT GGTGCAGGCA
CGTCAGGGTC TTGAGGACGC CGAGGCGGGA TATCTGAAGG TTTTCGGGAG CAAAGCGGAA
CAGTTGGCCA TGCCAGAAAG ACCGAAGCAG GCAATTCCTC CGACTCTTGA AGAAGGAATT
GCTCTCGCCA TGGACAACAA CCGCGCCTTG AAAGCCGCGC GCTTGGCCAT AAAGCAAAAG
GAAAAGGAGG CTGAATCAGC GAAGGGTCTG CACCTGCCTC AGCTCTACGC CAAGCTTGCA
GGGGGGCATT CCGACAATAC CGGAGGGTAC GAGCAGAATT ATCATGACGT ATCAGCCATG
CTGCAACTGT CCTTCAATTT GTACAGCGGC GGGTCCCTCT CGGCTGAGAT CAGAGAGGCG
AAAAGCGAAG TCTCCAAGTC CGTGCAGGAT GCCGAAGAAG TCCGCCGCGA GGTGGAGGAG
GATGTGCGGA CCGCATACAG CTTCCACCGT TCGACCTGGA AGCTGCTGCC GATTTTGCGC
GACCTGACCG ACGAGAATGC CGACATCGTC GTCAGTTACG CGGATCAGTT TCGCATGGGC
AAGAGATCCC TTCTTGACCT TGTTTCCGCG CAGAAGAGTC TGTTCAGTTC CCAGCAGGTA
TATCTGAACG CCATGGCAGC GCATACGTTC TCGTATTACC GGATTTGCAT GCCCATCGCG
GCCCTTATGA ACACTCTGGG TGTTAGCGTG CATGTTCCTG AACTGAACTA G
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| Protein sequence | MAWRAVRNTL IFLFMIMLVI CVSPALVRAK DGAGDGVGAV PAVSGAKNVN SILNKATAEN
GVSLQAALQS AMDTNPTFLS RKHAYSSSHE AYLKSFGALL PQVNVVARGG YQVIQNDTTS
FLYDDKQGEG WTNDMRVVMS QLLFDGGMTS SKVEADKLHS QSKQEELFNT AEDVGLTATQ
YFMEVIRNRA LIELCENNIV EHEKILELTR IRLNNGGGTQ VDVNQAEASL EEAKSRLVQA
RQGLEDAEAG YLKVFGSKAE QLAMPERPKQ AIPPTLEEGI ALAMDNNRAL KAARLAIKQK
EKEAESAKGL HLPQLYAKLA GGHSDNTGGY EQNYHDVSAM LQLSFNLYSG GSLSAEIREA
KSEVSKSVQD AEEVRREVEE DVRTAYSFHR STWKLLPILR DLTDENADIV VSYADQFRMG
KRSLLDLVSA QKSLFSSQQV YLNAMAAHTF SYYRICMPIA ALMNTLGVSV HVPELN
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