Gene Dbac_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1870 
Symbol 
ID8377542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp2130171 
End bp2130698 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content64% 
IMG OID645001098 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003158377 
Protein GI256829649 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0620182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCC TGCCGACACC CATTGGCGGA CTCCATCAGA TTGAAGGGGA GGCGCATCGT 
GATGCAAGGG GCTTTTTTCT GCGTACCTGG TGCCGGGAGG CGTTTCTGGC CGCTGGCATC 
GATTTTTTTC CCGTGCAGAC GAGCCTCTCG GCGAATATCC GTCGCCATAC TTTGCGCGGC 
ATGCATTACC AGGTTTCACC CGCCCGCGAA CGCAAGCTGG TCCGCTGCCT GCACGGCCGC 
ATCCTTGATG TGGTGGTCGA TCTGCGGGAC GGCTCGCCCA CGCGTTTGCG GCATTGGGCG 
GTCAACCTGT GTTCCGATGC GGGCAACGCC CTTTTTATCC CCGAAGGATG CGCCCACGGT 
TTCATGACCC TGACCGACGG GGCGCTGGTC GAATACATGA TGGACGCGCC TCACGCCCCG 
GAGCACGCAC GTGGGCTGCG CTGGGACGAC CCGGCCCTGG GGTTGTCGTG GCCGGCCAGA 
CCCGTGGTGA TTTCCCTGCG TGACCGCAGC TGGCCCGGCC ATGTCTGA
 
Protein sequence
MRILPTPIGG LHQIEGEAHR DARGFFLRTW CREAFLAAGI DFFPVQTSLS ANIRRHTLRG 
MHYQVSPARE RKLVRCLHGR ILDVVVDLRD GSPTRLRHWA VNLCSDAGNA LFIPEGCAHG 
FMTLTDGALV EYMMDAPHAP EHARGLRWDD PALGLSWPAR PVVISLRDRS WPGHV