Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1859 |
Symbol | |
ID | 8377531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 2118970 |
End bp | 2120040 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645001087 |
Product | RNA polymerase, sigma 32 subunit, RpoH |
Protein accession | YP_003158366 |
Protein GI | 256829638 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.539066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAAGA ACCACCTCCA GTCACGCACC ATCATGAATC CCAATCAACG ACCCGAAGAC AATGCTCTGG ATGAAGAGCT CGAAACACCC TTATCAGAGG ACACCGAAGA ATTCGATGAC GATGTCGTCG ACGATTCCGA CACGATCGAC ACTGTCGATA TCGATGAAAT CGCCCCGCTG GTCCTGGCCA CAGTCCCCCG ACGCGAAGTC GCGACCCTGG ACCCGCTGCA TATCTATCTT CAGGAAATCA AAAAATTCAA ACCCCTGGAA CAGGACGAAG AATTCGATCT GGCCAGGCGC TACCGGGACG AAAAGGAAGA GCAGGCGGCC TTTATCCTCA TCACCTCCAA TCTGCGGCTG GTGGTCAAGA TCGCCATGGA TTTCCAGCGG CGCTGGATGA AGAACGTGCT CGACCTGATT CAGGAAGGCA ACGTGGGCCT CATGAAGGCG GTCCAGAAGT TCGACCCGGA CAAGGGCATC AAGTTTTCCT ATTATGCCTC GTTCTGGATC AAAGCCTATA TCCTGAAATT CATCATGGAC AACTGGCGCA TGGTCAAGAT CGGAACCACC CAGGCCCAGC GCAAGCTGTT CTACAACCTG GGCAAGGAGC GCCAGCGCCT GCAGGCGCAA GGATTTGACC CGACGACATC CACCCTTTCC AAGAATCTGC AGGTCTCCGA AGCCGACATC GTGGAAATGG GTCAGCGCCT GGGACAACAC GATGTGTCCC TGGACATGAA GATCGGGGAC GACTCCAGCT TCACGCCCAT GGATTTCATT CCGGCTCTTG AGGCCGGGAT CGAGGAACAG ATGGCCGCCG ACGAGATCAG CGTGCTCATC CACGACAATA TTGACGCCAT ACGGGACGGC CTGAACGAAA AGGAACTCGA CATCCTGGAG CAGCGTCTTC TGGCCGACTC GCCTATCACC CTGCGCGAAA TCGGTGACAA GTACGGGATC ACCCGGGAAC GGGTACGCCA GATCGAAGCC CGTCTGCTGC AAAAGATCAA GGCCCAGATG TCGAGCACCA TCCAAGATTT CTCCTCAGAA TGGATTGAAC ATGAAGAATG A
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Protein sequence | MPKNHLQSRT IMNPNQRPED NALDEELETP LSEDTEEFDD DVVDDSDTID TVDIDEIAPL VLATVPRREV ATLDPLHIYL QEIKKFKPLE QDEEFDLARR YRDEKEEQAA FILITSNLRL VVKIAMDFQR RWMKNVLDLI QEGNVGLMKA VQKFDPDKGI KFSYYASFWI KAYILKFIMD NWRMVKIGTT QAQRKLFYNL GKERQRLQAQ GFDPTTSTLS KNLQVSEADI VEMGQRLGQH DVSLDMKIGD DSSFTPMDFI PALEAGIEEQ MAADEISVLI HDNIDAIRDG LNEKELDILE QRLLADSPIT LREIGDKYGI TRERVRQIEA RLLQKIKAQM SSTIQDFSSE WIEHEE
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