| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1858 |
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| Symbol | |
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| ID | 8377530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2116380 |
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| End bp | 2118791 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645001086 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_003158365 |
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| Protein GI | 256829637 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGATT TTCGCCAGAC ACTCAAGGGC GGAAACGTTC TTATTTTTGA CGGGGGCATG
GGAAGCCTGC TCCAGCGTCG TGGCCTTCAG GCCGGTCAGT CCCCCGAGGA ATTCGGCATG
GGGCGGCCGG ATGTTGTCGC GTCGATCCAT GCAGAATACG CCCGGTCCGG GGCGAATGTG
GTCACCACCA ACACGTTTGG CGCGACCCGG TACAAGCTCC CGCAGGGTTT TGACGTGTTC
GAGGTCAATG AAACCATGAC CCGCGCCGCG CGTCAAGCCG TGGGTGATGC GGTCTTCGTG
GCAGGCAGCG TCGGACCCAC AGGCAAGATG ATAAAGCCTC TGGGCGACAT CTCCTTTCGC
GGGTTGGTGG ATGTTTTCAA GGAGCAGATT CGCGGCCTGG CGGCAGGCGG AGCCGACCTG
ATCCTGGGCG AGACCCACTT CGATCTGGCC GAGGCCAGGG CCGTGGTCGT GGCCGCGCGC
GAGGTCTGCG ATCTGCCCGT TGGCATCAGC ATGACCTTCG AGGGTGGAGT CAGCCTGACC
GGGACCACCC CGGAAGTCTT TGCCCAGACC ATGGAAAACA TGGGTGTGGA TCTCATCGCC
TCCAATTGCA GCGCGGGCCC CGAGCAGCTG ATAGAGGTCG CCAAAGCCAT GCTCCGCGTC
AGCCGGACCC CGGTGCTCAT CGAGCCCAAC GCGGGCCTGC CCGAACTGGT GGACGGGGCC
ACGGTGTTTC GCCTGCCCCC GGATCCTTTC GCGGCCACGG TTTCGACCCT CGTGGACGTG
GGCGTCTCCT GTCTTGGCGG ATGCTGCGGC ACCACGCCGG AGCACATCAA GGCCCTCACC
GCGCTTTGCG CAGGCAAGAC CGTACGGCGT CAGGAAATTT CCGCTCCTCC CTGCCTGATT
GTCACGTCCC GTTCCCAGGC GGTCGAGTTC GGCTTTGATC GCCCCTGCCG GATCATCGGA
GAACGGATCA ATCCCACGGG CAAGGCTGAA CTCACGGCCG AACTGCAGCG CCTTGAGACC
CGTCGCCTGA TGACCTACGC CGAGGAGCAG GTCGCGCGCG GAGCCGATCT TCTGGACGTC
AACGTGGGCG CGCCCATGGT CGAGGAGGCG CGCATGCTGC CTTTGGCCGT GCAGGCCCTG
ACCAGCGCCC ATGCCATTCC TCTGTGCCTG GATTCAAGCG ACATCTCGGC CATCAGGGCA
GGCCTTGAGG CCTATCCGGG CTCGGCTCTG GTCAATTCCA TCAGCGGCGA GGAAGAGCGG
ATGGAGACTC TGGGGCCGCT GTGCCGGGAT TACGGCGCGC CGTTCATCCT GCTGCCGCTT
AAGGGACGCA AGCTGCCCGT TACGGCGGCC GAGCGCCTGG CCATCATCGA AGAACTTCTG
ATCAAGGCCG AGAGCCTGCG CATTCCGAGG CGGCTCATCC TGGTCGATGC TCTGGCCCTG
ACCGTGTCTT CCAAGCCCGA GGCGGCCAAG GCCTGCCTCG AAGTCATCCG GCACTGCCGG
GAGCGCTGGG GGCTGGGCTC GACCATGGGC CTGTCCAACA TCTCTTTTGG CCTGCCTGCC
CGGGACCTGA TCAATTCGAC CTTTCTGGCC ATGGCCATGG GCGTCGGCAT GACCTCTTTC
ATCGCCAACC CCAACGCCGC GCGCATCCGC GAGAATCTGG CGGCGGCGGA GGTGCTTCTT
GGCCGGGACA GCCAGGCCGC AGGCTTCATC GCCTCCTATG CCGGATGGAA CCCGGGAAAT
CCCGTGGCCG CGGTCGCTTC CACTGCGGTC GATGAGGACG GCAGCCCTGT CGCCGTGGCG
GTGATCAAGG GGCAGAAGGA TCGCATCGTC GATCTTTTGC GCGAGCGCAT CGCGGCTGGT
GAGGACCCTT TTGTCCTTGT CGACGGAGAG ATGATCCCCG CCATTGCCAA GGTTGGGGAA
AAGTACGAGA AGAAAGAGTA TTTTTTGCCG CAGCTCCTCT TATGCGCCGA AACCATGCAG
ATCGGCTTCG AGTCCATCAA ACACCTGCTC GTGCGTGAAG GTCAAGAGGC CAAGGCCACC
ATTGTCATGG CCACGGTAGA GGGTGACATT CATGACATCG GCAAGAATAT CGTCTGTCTG
ATGCTTAAAA ATTTCGGCTA TGATGTCGTC GATCTGGGCA AGGATGTGGC GGCCGCGGAC
ATTGTCGCGG CGGCCATGGC CCACAAGGCC TCGGTCATCG GCCTGTCCGC GCTCATGACC
ACGACCATGG TCCGCATGGA GGATACCGTG CGTCTGGTCC GCGAGCAGGG CCTTGCCTGC
CGGGTCATGA TCGGTGGCGC GGTGGTCAGC CAGTCCTATG CGGACCTGAT CGGCGCCGAC
GGCTATGCCG ACGACGCGGT GGCGGCGGTT CGGGTGGCCA CCCGGTTGTG CGCCGAGGTC
CGCTCGGCCT GA
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| Protein sequence | MRDFRQTLKG GNVLIFDGGM GSLLQRRGLQ AGQSPEEFGM GRPDVVASIH AEYARSGANV
VTTNTFGATR YKLPQGFDVF EVNETMTRAA RQAVGDAVFV AGSVGPTGKM IKPLGDISFR
GLVDVFKEQI RGLAAGGADL ILGETHFDLA EARAVVVAAR EVCDLPVGIS MTFEGGVSLT
GTTPEVFAQT MENMGVDLIA SNCSAGPEQL IEVAKAMLRV SRTPVLIEPN AGLPELVDGA
TVFRLPPDPF AATVSTLVDV GVSCLGGCCG TTPEHIKALT ALCAGKTVRR QEISAPPCLI
VTSRSQAVEF GFDRPCRIIG ERINPTGKAE LTAELQRLET RRLMTYAEEQ VARGADLLDV
NVGAPMVEEA RMLPLAVQAL TSAHAIPLCL DSSDISAIRA GLEAYPGSAL VNSISGEEER
METLGPLCRD YGAPFILLPL KGRKLPVTAA ERLAIIEELL IKAESLRIPR RLILVDALAL
TVSSKPEAAK ACLEVIRHCR ERWGLGSTMG LSNISFGLPA RDLINSTFLA MAMGVGMTSF
IANPNAARIR ENLAAAEVLL GRDSQAAGFI ASYAGWNPGN PVAAVASTAV DEDGSPVAVA
VIKGQKDRIV DLLRERIAAG EDPFVLVDGE MIPAIAKVGE KYEKKEYFLP QLLLCAETMQ
IGFESIKHLL VREGQEAKAT IVMATVEGDI HDIGKNIVCL MLKNFGYDVV DLGKDVAAAD
IVAAAMAHKA SVIGLSALMT TTMVRMEDTV RLVREQGLAC RVMIGGAVVS QSYADLIGAD
GYADDAVAAV RVATRLCAEV RSA
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