| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1850 |
|---|
| Symbol | |
|---|
| ID | 8377522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 2108607 |
|---|
| End bp | 2110163 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645001078 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_003158357 |
|---|
| Protein GI | 256829629 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.114808 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACCC TTTTGCCCAC TCCCGAGGAA ATGTCCCGCT GGGACAGACT GACCATCGAT
GAGTTCGGGC TGTCCGGACA AATCCTGATG GAAAACGCCA GCAGGGCCGC TCTCTATGCC
CTTAAAAAAG AATTCGGCCC CTTGCGAGCC GCGTCGGTCA TGGTTTTTGC CGGTCCCGGC
AACAACGGCG GCGATGCCTT CGCCCTGGCC AGACATCTGG TCAATCTGGG AGCGACGGTC
CTCATCCTGC ACGCCAAGCA CCTCGCGCAA TATACCCAGG ATTCCGCCTA CCATCTGAAG
CTGGCCATGG ACATGGGCAT CCCCTGCTCC TACCTGCCCG AATACGAGAT GGATCTGGTG
CCAAGGATCG ACATTATCGT GGACGGCCTG CTCGGAACCG GCTTCGAGGG ACCGCTGCGA
CCCAATGTGC AGGCATGGAT CAAGTCCATC AACAAATTGG GCGTCCATTC CTATGTCCTG
TCGCTGGACA TCCCTTCGGG GCTCAGCGGC ACCACGGGCC AGCCCATGCC TCAAGCGGTC
GAAGCCGACC TGACCGTGAC CTTCGAGGAG GCCAAGCTCG GACTCTTCCT GCCCCCGGCC
AAAAAACATG TGGGCAAGCT GGTCACGTCC AAGATCGGCA TTCCACGCCA CATCAAGGAC
CAGCACCCCA CCGCCCACGT TGCCCTGGGG CCGGACCTTG CGGATCTGCT GCCTGAACCG
GGCGCGACCA TGCACAAGGG AGACGCAGGA CATATTCTGA TCCTGGGCGG CTCCCCCGGC
CTGACCGGCG CGCCCATGCT TGCGGCCCGG GCGGCCTTTC GCTCCGGCGC CGGACTGGTC
AGCATCGCGT GTCCCAAGGC CCTGACTTCG GCCTACGGAA ACTTCCCCGA AATCATGACT
CTGGGACTCG GCAATTCGGA CCAATGGTGC TCAGGTTGCT TCGATTCCCT GCTGCCGAGT
CTTTCGCGCT ACTCGGCCGT GGTCTTCGGC CCCGGCCTTG GCCGCACCGA CGGAGCCATG
GCCTTTCTGG AACGCTATCT GGCCCAGCCT CACGCCAGAA CCCTCTACGA TGCCGACGCC
CTCTTCCTCC TGGCCCAGCG CCCCGACCTC CTGGCCCTCA TCGGCCCGGA CGCGGTGCTG
ACCCCGCATC CCGGCGAGAT GGCCAATTTC TTCGGCGTCA CGGCCGGAGC CATCAATCTC
GCCAGGGCCA GCTATGCAAG GGAATTTTCA TTCGGACGCT GCGTCAATCT GGTCTTGAAA
GGTGCGGCGA CCATCGTCGC CGGACACGAA GACCCCATTT CCATCTCACC CTTCTGCGCC
CCGAACCTGG CCATTGGAGG ATCGGGCGAC GTGCTCGCCG GAATCATCGG CAGCCTGATG
GCCCAGGGGC ACCCGCCATT GACCGCCGCC CGGATCGGCG TGTATTGGCA CGGATATGCG
GGCACCCAGC TCGCCAATGA TTTCCCGTAC CGGGGCAACA CCCCCATGGA AATCGCCGAT
TACCTGCCAA CCGCCTTGAA GGAGTGGAAA AAATGCGTAC AGCTCAAGAT ATCATGA
|
|---|
| Protein sequence | MVTLLPTPEE MSRWDRLTID EFGLSGQILM ENASRAALYA LKKEFGPLRA ASVMVFAGPG
NNGGDAFALA RHLVNLGATV LILHAKHLAQ YTQDSAYHLK LAMDMGIPCS YLPEYEMDLV
PRIDIIVDGL LGTGFEGPLR PNVQAWIKSI NKLGVHSYVL SLDIPSGLSG TTGQPMPQAV
EADLTVTFEE AKLGLFLPPA KKHVGKLVTS KIGIPRHIKD QHPTAHVALG PDLADLLPEP
GATMHKGDAG HILILGGSPG LTGAPMLAAR AAFRSGAGLV SIACPKALTS AYGNFPEIMT
LGLGNSDQWC SGCFDSLLPS LSRYSAVVFG PGLGRTDGAM AFLERYLAQP HARTLYDADA
LFLLAQRPDL LALIGPDAVL TPHPGEMANF FGVTAGAINL ARASYAREFS FGRCVNLVLK
GAATIVAGHE DPISISPFCA PNLAIGGSGD VLAGIIGSLM AQGHPPLTAA RIGVYWHGYA
GTQLANDFPY RGNTPMEIAD YLPTALKEWK KCVQLKIS
|
|---|
| |