Gene Dbac_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1842 
Symbol 
ID8377514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2100211 
End bp2101209 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content62% 
IMG OID645001070 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003158349 
Protein GI256829621 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0219325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAT TGGTGGTTGT GATCGCGATT CTGTTGTGCT CGGCTCTGTC CGCCCAGGCG 
GCGGAACTGG ATCCGGCCAA GGCCAAGGCC GAGGGCACGG CGACCTTCTA TGCCAACATC
ACCGCGGTGG AACCGATCAT GGAGGCTTTC GAGGCCGACA CCGGGGTCAA GGGCGCGTAC
ACCAGAATTT CCACTTCGAA ATTCCTCGCC ACTGTCCTGA CGGAATTCGA GGCGGGTAAA
CTCATGGCCG ACGTGGTGCA GGCGCCGCTT CCGGTCCTGG AGATTCTTAA ATCCAAGGGC
GTCCTCGCCT CCTACAGTTC ACCGGCCGCC GCCGGCTATG CGGACTGGAC CAGAAAGGAC
GACGCCATCC AGCTTTTCGG CATCGAGTAC GTAGGGCTCA TCTACAACAA GGAGCTGGTC
AAGGCGGCCG ACGTTCCCAA GCGTTACGAG GATCTGGCCG ATCCGAAGTG GAAGGACAAG
ATCGTGATGG CCAACCCCGC CAATCACGCC ACCACCATCT CCTGGCTGGT CGGCCTCAAG
GAAACCGTGT TCACGTCCGA AGAGGAATGG ATGAGCTTCC TCAAAGGGCT GGCCGCCAAC
AAACCCATGT TCGTGGCCTC CTTCGGCCCC ACGCCTGCTC CGGTGGAGAG CGGCGAGAAG
CTCATCGCCA TCTCCATGCC CAAATACATC ATCACCAAGG CTCCGGCTCC CCTGGACTGG
GCCCGGGTGG AGCAGCCGTT GCTGGGCACG CCGCGCGCCA TCGCCGTGAC CTCCAAGGCC
CCGCACCCCA ATGCCGCCCG TCTTTTCGTG GACTACTGGC TGTCCGAAAA GGCCATGGGC
ATCCTGGCCA AGGACGTGGG TGAATACGTC CTTGCGCCCG GCGTCTATCC GCCCATCGAT
GGCATGGACA AGGCCGAGGT CATGCCCATC CGCGATCTCT CCGACGAGGA GATCCAGAAG
TGGGGCGACC AGTTCAAGAC CATCTTCGAC GTGCAGTGA
 
Protein sequence
MKRLVVVIAI LLCSALSAQA AELDPAKAKA EGTATFYANI TAVEPIMEAF EADTGVKGAY 
TRISTSKFLA TVLTEFEAGK LMADVVQAPL PVLEILKSKG VLASYSSPAA AGYADWTRKD
DAIQLFGIEY VGLIYNKELV KAADVPKRYE DLADPKWKDK IVMANPANHA TTISWLVGLK
ETVFTSEEEW MSFLKGLAAN KPMFVASFGP TPAPVESGEK LIAISMPKYI ITKAPAPLDW
ARVEQPLLGT PRAIAVTSKA PHPNAARLFV DYWLSEKAMG ILAKDVGEYV LAPGVYPPID
GMDKAEVMPI RDLSDEEIQK WGDQFKTIFD VQ