| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1834 |
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| Symbol | |
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| ID | 8377506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2089510 |
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| End bp | 2091720 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645001062 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003158341 |
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| Protein GI | 256829613 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.273222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGT CATCCCGTCA CATTCCTGTG CAGGAACGCA CCGCCCATGA ACGACGCAAG
CGGCAACGGG AAATCACCCT GGCCTTTGTG GGCATCTTCC TCATCGTCAT CCTGACCTGG
ATCGAGCTGC GCCTGCTGGG GCTCAATTCC TATCTTTTCT TCGCACTCTT CAACGTCAAC
CTGATTCTCC TCATTCTGGT CCTTTTTCTG GTCCTGCGCA ATGTCATCAA GCTTATTCTG
GACCGGCGAA GGCGGGTCCT GGGGTCGGGC CTGAGATCCA AGCTGGTCCT CATTTTCGTC
ACGCTGTCCA TGGTCCCGAC CTTTATCATG TTCGTCCTCT CGACCTGGTT TGTGCAGACA
TCCGTCGATT ACTGGTTCCA GGCCCAGGTC GAGACGTCCA TGGACCAGGC TTTAAGCGTG
GGACAGGATT TTTATGCGGC CGCCGAATCC GGACTTGAGA TCAAGGCGCT GGGCATTCTG
GCACATTTGC GGGAACGCAA GCTGGATTTC AACGCCAAGG GGGCGGACGC GGCCCTGCGG
CAAAAAAGCC GGGAATACAG GCTGAACCTG AGCGGCGTGA TCACCAGGGC CATGCAGCAA
AAAAACTGGG ACGCCGATCC GGTCTGGAAC GATGTCTGGC CCCGGATCAG GGACGAGGTC
CCTTTTGCGG AGCTTGGCAA GGATTTTAAG TATTGGGCCA CCCTTTGGCC GCATCCGGAT
TCGGATCTGG TGGTCGGCGT AATGTCCGTG GACGAGGCCG GGTCGGCCTT TCTTGTCGTG
GGCGCGGAAG TGGGACCCGG CTTTCTGGAC CGCCTGGAGC AGATCGCCCA GGGCGTGGGT
GAGTACAAGC AGCTCCGAAG CCTCAAATAT CCTCTGAAAA TGACACTTTA CATGGTTCTT
GGGCTCATGA CCATGCTCAT CTTTCTCGGC GCGACCTGGT TTGGCTTTCG CCTGGCCAGG
GAACTCAGTG CTCCGATCCA GGCGTTGGCG GCGGGGACCC AGCGCATCGC CCAGGGTGAC
CTTTCGGTGC GGCTCGTGGA CGAATCCCGC GACGAGCTTG GTCTTCTGGT CCAGTCCTTC
AACAGCATGG CCGAGGATCT GGAGCAGAGC CGCGCGCATC TGACCCGCGC CAACCTGCAA
CTCGAAGAGC AGTATCAGAC CCTTATCGCC AAGAATCATT ACGTGCAGGC CATTTTGGAG
AATATCACCG CGGGCGTGGT CTCCCTTGAC CGAAGCGGGC GGATCACGAC CATGAACCGC
GCGGCCGAGG CCATTCTCGG CCTGGAAGCC GGAGCGCTTA TCGGTGAATC CGCTCTTGAC
CTGATGGGCC CCGCCCATCG CGGTCTGGTG CAGGAGGTCA GCCAGCTGCT GCGTAGCAGT
CCCGGCTCCC AGTGGCAGCG CAGGCTTGAT CTGGAGGCCC GCGGCGAGAC GATCAAGCTG
CTGGTCAACG CGGTGGCGCT GATGGACAGC GAGGGCGGCG ACAGCGGTAT TGTCGCGGTG
TTCGAAAATA TTTCAGAACT TGAAAAGATG CAGCGCCTTG ACGCCTGGAA GGAAGTGGCC
CGGCGCATCG CTCACGAGAT CAAGAATCCG CTCACGCCCA TAAAGCTTTC GGCCGAGCGC
CTGGAACGCA AGTTCGGGCC CGTGGTGGCG GACCCCGTCT TTACCCAGTG CACGGGGCTC
ATCGTCAAGC AGGTCGAACA CTTGCAGGAG ATGGTGCGGG AGTTCTCAAG CTTTGCCAAA
TTGCCCGAGG TGATGCTGAC GGCTGGCCGC ATCGAGCCCC TGCTGCAGGA GTCCATCTCC
GTTTTTTCAA GCAGCCATGC CTCCATCCGC TGGGTGCTGC GGACCGAGGA GGTGCCTCTG
GTCATGCTTG ACCGTGAAGC CATGGGCCGC GCCATCTACA ACATCCTGCT CAACGCGGCC
GAGGTATTGG CGGACCAGGA GGACGGCCGG GTCGAAACCG TCCTCTATGC GCGCAAGCGC
AAGGGCCGGA TCTATATTGA AATCAGCGAC AACGGCCCCG GTATCAAGCC CGAGGAGCAG
TCGCGCATGT TCGAGCCCTA CTATTCGACC AAGCGCAGCG GCACCGGCCT TGGCCTGGCC
ATCGTCAAAT CCATCGTCAG CGACCATCAC GGGCATATCC GGGTCAAACC CAACGAACCG
GCCGGGACCA CTTTTGTCAT AGAACTTCCA GCCGCCCGCA GCGAGGCATG A
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| Protein sequence | MDKSSRHIPV QERTAHERRK RQREITLAFV GIFLIVILTW IELRLLGLNS YLFFALFNVN
LILLILVLFL VLRNVIKLIL DRRRRVLGSG LRSKLVLIFV TLSMVPTFIM FVLSTWFVQT
SVDYWFQAQV ETSMDQALSV GQDFYAAAES GLEIKALGIL AHLRERKLDF NAKGADAALR
QKSREYRLNL SGVITRAMQQ KNWDADPVWN DVWPRIRDEV PFAELGKDFK YWATLWPHPD
SDLVVGVMSV DEAGSAFLVV GAEVGPGFLD RLEQIAQGVG EYKQLRSLKY PLKMTLYMVL
GLMTMLIFLG ATWFGFRLAR ELSAPIQALA AGTQRIAQGD LSVRLVDESR DELGLLVQSF
NSMAEDLEQS RAHLTRANLQ LEEQYQTLIA KNHYVQAILE NITAGVVSLD RSGRITTMNR
AAEAILGLEA GALIGESALD LMGPAHRGLV QEVSQLLRSS PGSQWQRRLD LEARGETIKL
LVNAVALMDS EGGDSGIVAV FENISELEKM QRLDAWKEVA RRIAHEIKNP LTPIKLSAER
LERKFGPVVA DPVFTQCTGL IVKQVEHLQE MVREFSSFAK LPEVMLTAGR IEPLLQESIS
VFSSSHASIR WVLRTEEVPL VMLDREAMGR AIYNILLNAA EVLADQEDGR VETVLYARKR
KGRIYIEISD NGPGIKPEEQ SRMFEPYYST KRSGTGLGLA IVKSIVSDHH GHIRVKPNEP
AGTTFVIELP AARSEA
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