| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1831 |
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| Symbol | |
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| ID | 8377503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2084356 |
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| End bp | 2086737 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645001059 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003158338 |
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| Protein GI | 256829610 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.836817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCA TCATTCTTCT CCTCCTGCTG CTCGTGCCGC CCCTGCCCCT TCTGGCCGCC
CCGCCGAACG TGCTCGTCCT GCATTCCTAT CATCCTGGCC TGTCCTGGAC CGACACGCTC
AACACGGGCA TCCGCGAAAC CTTTCGCGCC GAGATGCCTG AGGCCTTGCT GTGGGTTGAA
TACCTGGACA CAAAGCGCAA CACCGACACG TCCTATCTCT CCCTGCAGGC CGCGCTCCTG
CGGCACAAGC TGGCCGAGAG CACCTTCAAC CTGATCATAA CCACGGACAA CGATGCCCTG
GATTTCGTGC TTAAGTACCG GGACGACATT TTTCGCGGCG CGCCCGTCGT CTTTTGCGGC
GTCAACGATT TTGCGCCCGA ACAATTGCGA GGCCAGAAAG ACATCACCGG CCTTGCCGAA
AACCCGGCCT TTGCCGAAAC CATGCTCGCG GCCCTCGCCC TGAACCCCGG CACAAAAGAG
TTCGTGGTCA TCGGCGCGGA CCAGGCCATC ACCGACCTGC TCACCGACCG CTCCCTGCGC
GCCCTGGAAC AGCAGTTTCC GGCCATCCGC TTCACCTACT GGAACAACCT TGACGCGCGG
GAACTGCGCA CCCGTCTCCA AGAATTGGGC CCCGGCCAGA TCATCCTCAT CCACGGGGTC
ATGCGCAACG AGGAAGGGGT GCTGGTCGAT TATCGCGGCA AGAATCTCTT CCTCTCCACC
CACGCCGGGG TGCCCATCTA CGGATTCTGG GATTTCGAGA TGGGCACGGG CTGCGTCGGC
GGCAAGATGG TGCAGGGGCA GACCGAAGGC GAGCGCGTGG CCAGGTTGGC CATGAAAGTC
CTCGGCGGAG CCGACCCGGG CGCCATCCCC GTGAACACGC AGACCCCGTC GCGCTACATT
TTCGACTACA TCCAGCTGCA GCGCTTCGGC ATCAGCGAAA AGGCCCTGCC AAAGGACAGC
CTGGTTCTCA ACCAGCCCGC GCGTTTCTAT CAGATCGACA AGCGTTACAT CTGGACCGCC
ACGGCGGGCG TGGCCGTGCT GCTGGCCGCC CTGGCCATGC TGGTCAGCGC CATCCGTCGC
CGCCAGGAGG CGCAAGCCGT GCTGCGCCGT CACAAGGAGC AGCTCGAAGA GGCGGTCCGC
GCCCGCACCG AGCATCTGCG AACAGCCAAC GACGAACTCG AACGCGAGGT CCACGAACGC
ATCCGGGCCG AGGGAGACCT GCGCAAGGCG CGGGCCAGCC TGGAAATCGA GGTCGACCGG
CGCACCCGCG ACCTGCGATT CGAGATTGAG CAGCGCCGTC TGGCCGAGGC CCATATCCGC
GACCGCGAAG CCAAGGCCAG GGCCCTCATC AACGCCCCCA CCGAGACCCT GCTGCTCATG
GATCAGGCCG GGATCATCCT CGACATCAAC GAAACCGGAG CCTCGCGCCT GGGCAGAAAC
CGCGAGTCGC TCTACGGACT GTCCCTCTAC GCCCTGCTGC CTGAAACGCG CGCCGAGCGC
TTCCGCCAGG CAGTGGACAA CGTATTCTCC ACCGGCGAAG TCCGGTCCAT CAACGAATAC
GGTGAGGAGC GCGATCTGGA CCTGCGCTTC TATCCCGTTT TCGACGACGG AGGCCAGGTC
ACGCGCGTGG CCGTGTTCAT GGCCGACGTC ACGGGAGCCA GGCGCATGGC CCGGCAGATC
ATGCTCCTCG ACAAGATCAA TTCACTGGGC CGCATGGCTG CCGGCATCGC CCACGAGATC
CGCAACCCGC TGACGGGCAT CCACGGCTAT CTCTACGCCA TGGACGAGAT CTGCGACGAA
CTGCCCGCCG AACCGGCCTC CGTGCTGCGC ACAACCATCG CCAAGATCCG CAAGGCTGCG
GGCAAGATGG AGTCCGTCAT CCGCAGGGTG CTCGATTTTT CCAAGCCCGG CACGCCGCAG
CTCGAACTCC TCGATCTGGC CGTCCCCGTG CAAGAGGGCC TCAGCCTCAT GCTTCCGACC
CTGCGCAAGG CCGGAATCAC CGTGGACACG GAGTTCTCCC CTGTTCCGGC CATCCTCGGA
GACCGCATGC AGCTTGAGCA GGCCGTCATC AATATCGTGG ACAACGCGGC CCGGGCGGTG
CGCAACAATG CCGGGGCAAA AAACATCGCC CTGCGCATCG TCTGCGAAGA AGACCGGCTG
AGCCTGCGCA TCGCGGACAA CGGGCCAGGC ATCACCCCGG CCGACCGGGA ACGCATTTTC
GACCCCTTCT ACACCACCGC AAGCGACGGC ACGGGCATCG GCCTGTCCAT CGTGCAGCGC
ATCGTCGCCG ACCACAGCGG CACCATCCAT GTGGGCGAAA GCCCTGCGGG CGGCGCGGAG
TTCAGGCTCG AATTCCCCCG GCCCGCCACG GAGCACAAAT GA
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| Protein sequence | MMRIILLLLL LVPPLPLLAA PPNVLVLHSY HPGLSWTDTL NTGIRETFRA EMPEALLWVE
YLDTKRNTDT SYLSLQAALL RHKLAESTFN LIITTDNDAL DFVLKYRDDI FRGAPVVFCG
VNDFAPEQLR GQKDITGLAE NPAFAETMLA ALALNPGTKE FVVIGADQAI TDLLTDRSLR
ALEQQFPAIR FTYWNNLDAR ELRTRLQELG PGQIILIHGV MRNEEGVLVD YRGKNLFLST
HAGVPIYGFW DFEMGTGCVG GKMVQGQTEG ERVARLAMKV LGGADPGAIP VNTQTPSRYI
FDYIQLQRFG ISEKALPKDS LVLNQPARFY QIDKRYIWTA TAGVAVLLAA LAMLVSAIRR
RQEAQAVLRR HKEQLEEAVR ARTEHLRTAN DELEREVHER IRAEGDLRKA RASLEIEVDR
RTRDLRFEIE QRRLAEAHIR DREAKARALI NAPTETLLLM DQAGIILDIN ETGASRLGRN
RESLYGLSLY ALLPETRAER FRQAVDNVFS TGEVRSINEY GEERDLDLRF YPVFDDGGQV
TRVAVFMADV TGARRMARQI MLLDKINSLG RMAAGIAHEI RNPLTGIHGY LYAMDEICDE
LPAEPASVLR TTIAKIRKAA GKMESVIRRV LDFSKPGTPQ LELLDLAVPV QEGLSLMLPT
LRKAGITVDT EFSPVPAILG DRMQLEQAVI NIVDNAARAV RNNAGAKNIA LRIVCEEDRL
SLRIADNGPG ITPADRERIF DPFYTTASDG TGIGLSIVQR IVADHSGTIH VGESPAGGAE
FRLEFPRPAT EHK
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