| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1792 |
|---|
| Symbol | |
|---|
| ID | 8377464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 2043552 |
|---|
| End bp | 2045096 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645001020 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003158299 |
|---|
| Protein GI | 256829571 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0136295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAC TGCTCTTTTT CGCGCTGGCA TTCATCTTTC TGGCCACGGC TGCCCAAGGC
AAAACCCTGA AGATGGCCCT CGACGCCGAT CCGGAGTCCA TGGACCCGCA TGTCCAGCTC
TCCGGCGGCA TGCTGCAGTA CACCCACCTG TGCTTTGATC CGCTGATCCG CTGGACCAAG
GACATGAAAT TCGAGCCCCG CTTGGCCACC AAGTGGGAGC GCATCGATGA CCTGACCGTG
CGTTTTTATC TGCGCGAAGG CGTCAAGTTC CACTCCGGCA ACCCCTTCAC CGCCGCCGAC
GTGGTCTGGA CCATCGACCG CCTGAAGAAA AGCGAAGATT TCAAAGGCCT CTTCACTTCC
TTCGCAACCC CCAAGATCAT CGACGACTAC ACCGTCGACA TCATCACCAC CGAGCCCTAT
CCGCTGGTGG AAAACATGGC CACCTACATC TTCCCCCTTG ATTCCAAGTT CTACACCGGC
ACCGACGAAA AGGGCCTGCC CAAAGACGCC ATCGTCAAGA CCGAATATTC CTTTGCCAAC
CAGAACGAGT CCGGCACCGG ACCTTTCTAT GTCGAGTCCC GCGAACAGGG CGTGAAGATG
GTCTACAAGC GCTTCGCCGA CTACTGGGAC AAGGACAGCA AGGGTAACGT AAGCGAAATC
ATCCTCACCC CCATCAAGGA AAACGCGACC CGCACAGCGG CCCTCCTGTC CGGCGGCGTC
GACTTCATCG CCCCTGTCCC CCCCCAGGAT TTCGAACGTC TGGGCAGCAA CAAGGACATC
AACCTGGTCT CCATGGCCGG CAGCCGCATC ATCACCTTCC AGCTCAACCA GAAGAGAAAG
CCTGAATTCG CGAACCTCAA AGTCCGTCAG GCCGTCATCG CGGCCATCGA CAACGCCGGC
ATCGTGGCCA AGTTGATGAA GGGCACCGCC ACCGCCGCCC AGCAGCAGGG CCCGGAAGGC
TTTGACGGCT ACGTGGAAGG CCTGGCCCCC CGCTTCGACC TGGCCAAGGC CAAGCAGCTG
ATGAAGGAAG CCGGTTTCGA GAACGGCTTC GAAGCGACCA TGATCGCCCC CAACAACCGC
TACGTGAACG ACGAGAAGAT CGCCGAAGCC GTGGTTTCCA TGCTCTCCAA GATCGGCATC
AAGGTCAGCC TGAAGACCAT GCCCAAGGCC CAGTACTGGG ATGAATTCGA CGCCCAGGTG
GCCGACATCC AGATGATCGG CTGGCACTCC GACACCGAGG ACTCCGCCAA CTACTCCGAA
TACCTGCTCA TGTGCCCCAA CAAGGAAACC GGCAAGGGCC AGTACAACAG CGGCAACTAT
TGCAATGCCA AGCTCGACGA ACTGGTCAAC CAGGCCAACG TCGAGAACGA CCGCGTAAAG
CGCAAGGCGC TGCTGCAGGA AGTTGAGAAG ATCGCCTACG AAGACGCCGC CTATGTGCCC
CTGCACTGGC AGAACCTGTC CTGGGCAGCC AAGAAGGGCG TGGATATCCA GCCCGTCGTC
AACATCATGG ACTTCCCGTA CCTGGGCGAC CTAGTCGTGG AATAG
|
|---|
| Protein sequence | MKKLLFFALA FIFLATAAQG KTLKMALDAD PESMDPHVQL SGGMLQYTHL CFDPLIRWTK
DMKFEPRLAT KWERIDDLTV RFYLREGVKF HSGNPFTAAD VVWTIDRLKK SEDFKGLFTS
FATPKIIDDY TVDIITTEPY PLVENMATYI FPLDSKFYTG TDEKGLPKDA IVKTEYSFAN
QNESGTGPFY VESREQGVKM VYKRFADYWD KDSKGNVSEI ILTPIKENAT RTAALLSGGV
DFIAPVPPQD FERLGSNKDI NLVSMAGSRI ITFQLNQKRK PEFANLKVRQ AVIAAIDNAG
IVAKLMKGTA TAAQQQGPEG FDGYVEGLAP RFDLAKAKQL MKEAGFENGF EATMIAPNNR
YVNDEKIAEA VVSMLSKIGI KVSLKTMPKA QYWDEFDAQV ADIQMIGWHS DTEDSANYSE
YLLMCPNKET GKGQYNSGNY CNAKLDELVN QANVENDRVK RKALLQEVEK IAYEDAAYVP
LHWQNLSWAA KKGVDIQPVV NIMDFPYLGD LVVE
|
|---|
| |