Gene Dbac_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1783 
Symbol 
ID8377455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2029059 
End bp2030123 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content65% 
IMG OID645001011 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_003158290 
Protein GI256829562 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGG TTTGGGGAAA GAATCTGTTT TTGGGTCTTG TCCTTTGTCT GGGCGTTTTT 
TCTGCCGGGT GCTCCGATGG GCCGGCGGAT TCTCCGGTTT CCAATGCCTC GGAACCGGCC
AGGCCGGCTT ACGTGGTCAA TGTCCTGACC GAGGAGGTCA AGGCCGTCAC CATGCGCGAC
ATTCTGGTCC TGCCTGGGGA GACCGAGGCC CTGCATGATG TGCGCCTGGC CGCTCAGCGC
GGCGGCGTCG TGGAGTGGGT CGGCGTGACC GAAGGGAGCG CCGTGCGCAC GGGAGATCAT
GTCGCCCGCA TCGACCTGTC GGCCTTGGGC GCCGCCCGTG ATCGCGCGCG GGCGAACGTG
CAGTTGGCCG ACGATCAGCT GCGGCGCAGG CAAGCGCTTC ATGCGCAGGG CGTTCTTGCC
CGGGAGGAGC TGGATCAGGC CCGCAACGAG CTGACTTCGG CCAGGACGCG GCTGCGCGAG
ACCGAGGTTG AATACGAGTA CGGCACGGTG GCCTCGACCC TGGAAGGCGT GGTCAACAAG
GTCCATGTCG ATCCCGGAGA ATTCGTGGCC GAGGGTGGGC CTGTGGCGGA TATCGTCAAT
GTGGCCACCA TGCGCATCAA CTTTTCCGTG CCTGAAGGCG ACGTGCGTTT CCTGGCCAAA
GGGCAAGAGG TCACGGTGCT TGTCGACACC TATCCCGAGG GGCGGTGGAC AGGGACGATT
GATTTCGTGG CCTGGAAGGC CGACTCCGCG ACCCGTACCT TTCAGGTCAG GGTGGTGGTG
GACAATGAGG GCGGTATGAT CCGGCCCGGC ATGATCGCGC GGGGCGCATT TCTGCGTCGT
CTGATTGAGG GTGCCGTGAC CGCGCCGCTC TTCACCGTGC AGGACAAGGG CGGGGAGCGG
ATCATTTTCG TGGAGCAGGG CGGAGTGGCC CGGGCGCGCA CCGTAAAGCT CGGCATCATC
GAAGGCGACC GCGTGCAGGT GCTGGAAGGA CTGGCCGCCG GTGACAGGCT TATCGTGGCC
GGGCACGCCG AGGTCGAGGA CGGGACGCAG GTGAACGTGC GATGA
 
Protein sequence
MNMVWGKNLF LGLVLCLGVF SAGCSDGPAD SPVSNASEPA RPAYVVNVLT EEVKAVTMRD 
ILVLPGETEA LHDVRLAAQR GGVVEWVGVT EGSAVRTGDH VARIDLSALG AARDRARANV
QLADDQLRRR QALHAQGVLA REELDQARNE LTSARTRLRE TEVEYEYGTV ASTLEGVVNK
VHVDPGEFVA EGGPVADIVN VATMRINFSV PEGDVRFLAK GQEVTVLVDT YPEGRWTGTI
DFVAWKADSA TRTFQVRVVV DNEGGMIRPG MIARGAFLRR LIEGAVTAPL FTVQDKGGER
IIFVEQGGVA RARTVKLGII EGDRVQVLEG LAAGDRLIVA GHAEVEDGTQ VNVR