Gene Dbac_1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1757 
Symbol 
ID8377429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp1999967 
End bp2000992 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content60% 
IMG OID645000985 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_003158264 
Protein GI256829536 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.783502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGA TTCCCGTAGT GGCCGTGGTT GGCGCGACTG GCGCCGTTGG CAGAGAGATG 
CTCGATACGT TGGTTCGCCG GAATTTCCCC CATGCGGAAG TGCGGGCTCT TGCCTCTTCG 
CGCTCCGCGG GTACCAAAGT GGAATTCGGC GCGAAAAAAC TGACGGTGCA GGAATTGACC 
GAAGATTCCT TTGTCGGCGT TGATCTGGCC CTTTTTTCCG CCGGCGGTTC CACGTCCGAA 
AAATTCGCGC CCTGCGCGGT CAAGGCCGGT TGCGTGGTGG TCGACAACTC CAGCGCCTGG 
CGCATGGACC CGGCCGTTCC CCTGGTCGTC CCCGAGGTCA ACCCCGATGA TCTCGCCTGG 
CACAAGGGCA TCATCGCCAA CCCCAATTGT TCGACCATCC AGATGGTCGT GGCCTTAAAA 
CCGCTGCATG ACGCCGCCCG CATCAAGCGC GTCGTGGTCT CCACCTATCA GGCTGTTTCC 
GGCACCGGCC AGAAGGCCAT CGTCGAACTG GAAAATCAGG TGCGTCAGCT TTTCAACGGC 
CAGGAAGCCA CCAATACGGT TTATCCGCAC CGCATCGCCT TCAACTGCCT GCCCCAGATC 
GACGTCTTCC TGGACAACGA GTACACCAAG GAAGAGATGA AGATGGTCCT TGAGACCAAG 
AAGATCATGG GCGACGATTC CATTCGGGTC ACCGCCACCG CCGTGCGCGT GCCGGTTTTC 
TACGGCCACA GCGAAAGCGT GAACATCGAG ACCGAAAAGA AGCTCACCTC CAAGGAGGCC 
CGCGCCATCC TGTCTCAGGC TCCCGGCGTG CGCGTCCTCG ATAATCCCGG CGAGAAGATC 
TATCCCATGC CCATTTTCGC CGCGGGCGAG GATGAGACCT TCGTGGGCCG CATCCGCGAG 
GACGAGAGCA TCGAGAACGG CCTGAACATG TTCATCGTGG CCGACAATAT CCGCAAGGGC 
GCGGCTCTGA ACGCCGTCCA GATCGCGGAG GTGCTCCTGG AACGCGATCT TTTGCGCATT 
TCGTAA
 
Protein sequence
MKKIPVVAVV GATGAVGREM LDTLVRRNFP HAEVRALASS RSAGTKVEFG AKKLTVQELT 
EDSFVGVDLA LFSAGGSTSE KFAPCAVKAG CVVVDNSSAW RMDPAVPLVV PEVNPDDLAW 
HKGIIANPNC STIQMVVALK PLHDAARIKR VVVSTYQAVS GTGQKAIVEL ENQVRQLFNG 
QEATNTVYPH RIAFNCLPQI DVFLDNEYTK EEMKMVLETK KIMGDDSIRV TATAVRVPVF 
YGHSESVNIE TEKKLTSKEA RAILSQAPGV RVLDNPGEKI YPMPIFAAGE DETFVGRIRE 
DESIENGLNM FIVADNIRKG AALNAVQIAE VLLERDLLRI S