Gene Dbac_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1729 
Symbol 
ID8377401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1969684 
End bp1971822 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content62% 
IMG OID645000957 
Productprotein of unknown function DUF162 
Protein accessionYP_003158236 
Protein GI256829508 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAGG CCAAAAATCT TTCCGAATAT AACGACGAAC TGCGCGAAGC TCTGGACAAC 
ACCTTCCTGC GCGGAGCCAT GGACAAATTC GCCACGGCCT ACCCCGTTGG CCGGGCCAAC
GCCTTCCGCG AATACGACGT GGAGGCCCTG ATCCAGGAAG TGGTCAAGGC CAAGGATGCA
GGCCTGACCC GCCTGGACGA ACTTTATGCC GAGTTCAAGG CCAAGGCCGA AGCCAACGGC
GTGAAAGTGC ACATGGCCAA GGACGGCGAC GAGGCCAACG AGATCGTGGC CCGCATCGCG
GCCGAAAACA AATGCAAGAT CATCGTCAAG TCCAAGTCCA TGACGGCCGA GGAAACCCTT
TTGAACCACC GTCTGGAAAA AGACGGACTT GAAGTGGTCG AGACCGACCT TGGCGAATGG
ATCATCCAGC TCCGGCACGA AGGTCCCAGC CACATGGTCA TGCCGGCCAT TCACCTGTCC
CGCTACCAGG TCGCCGAACT CTTCTCGCAG GTCACCAAGC ATGACCAGTC CTCGGACATC
CAGCGTCTGG TCAAGGTCGC CCGTCGCGAG CTGCGCCAGA AATACGCCGA TGCCGACATG
GGCGTGAGCG GAGCCAACTT CGCCATCGCC GAGACCGGCA CCATTGGCCT CATGACCAAC
GAGGGCAACG CCCGCCTGGT CACCACCCTG CCCCGCGTGC ATGTGGCCAT CGCCGGCATC
GACAAGCTCT GCGGCACCCT GGACGACGCC CTGAAAATCC TGCGTGTTGT TCCCAAGAAC
GCCACGGGTC AGGCCATCAC CTCCTACGTG ACCTGGATCA GCGGCGCCAA CGAGTGCCAG
ACCGCGCCCG GCGGCAAGAA AGAGATGCAC ATCATCTTTC TGGACAACGG CCGCAGCGAA
ATGGCCAAGG ATCCCCTCTT CGCCCAGGTT CTGCGTTGCG TGCGCTGCGG CGCCTGCGCC
AACGTCTGCC CGGTCTACCG CATGGTCGGC GGCCACCAGA TGGGCCACAT CTATATCGGC
GCCATCGGCC TCATCCTGAC CTACTTCTTC CATGGCAAGG ACAAGGCCAA GAACCTGGTC
CAGAACTGCA TCAACTGCCA GGCATGCAAG CACATCTGCG CGGCCGGCAT CGACCTGCCC
CTCCTGATCA AGGAAATCCA TGCGCGCATC CTGGATGAAG ACGGACATCC GCTGCCGTCG
ATGCTGCTGG GCAAGCTGCT CAAAAACCGC AAGCTCTTCC ATGCCTTCCT GCGCACGGCC
AAGATGGCTC AGCGTCCGCT GACCGGCGGC ACGCAGTACA TCCGCCATCT GCCCCATATC
TTCTCCAAGG ATCATGGATT CAAGGCACTG CCAGCCATTG CCGCCAAGCC CTTCCGGGAT
CGTTTCGCGG CGCTGAAACC CACGGTTTCC GCACCCAAGT TCCGCATCGC CCTGTTCTCG
GGCTGCGTGC AGGACTTCGT CTATCCGGAG CAGCTGGAAG CGGCGGTGAA AGTTCTGGCC
GCCCACAATG TGGCGGTGGA CTTCCCCATG GATCAGTCCT GTTGCGGGCT GCCGCTGCAG
ATGATGGGCG AGAAGAAAGC AGGCGTCGAC GTGGCCAAGC AGAACATCGC GGCCATGAGC
GGCGACTACG ACTACATCAT CACCCTCTGC GCCTCCTGCG CTTCGCACCT GAAGCACAAC
TACCCGTTCC TGCTTGGTGA AAACGACGCG GAAGCCAAGG CCTTCGCCGA CAAGGTCATG
CCTTTCTCGG CCTTCATGAC CGATGTGCTC GGCGTGACCG CCGACGGGTT CAAGCAGACC
CACGAGCGCG CCACCCTGCA CGCCCCCTGC CACCTCTGCC GTGGCATGGG CGTGGTCGAA
CAGCCCAGAC AGCTTCTGGC TCTGGGCGGC TATGAATACG CCCAGGCGGA GCAGGAGCAG
GTCTGCTGCG GATTCGGCGG CACCTACTCG GCCAAGTTCC CCGGGATTTC CGAGCAGATC
CTCAAGAACA AACTGACCGA TGCGGGCCGT ACCGGAGCGG AAGTGCTGGT CACCGAATGC
CCGGGCTGCA TCATGCAGCT GCGCGGCGGC GCTGAAGTCA ACAAATCCGG CTTTGCCGTC
AGGCATATCG CCGAAGTGCT GGCCGACCAC CTGAAATAA
 
Protein sequence
MQKAKNLSEY NDELREALDN TFLRGAMDKF ATAYPVGRAN AFREYDVEAL IQEVVKAKDA 
GLTRLDELYA EFKAKAEANG VKVHMAKDGD EANEIVARIA AENKCKIIVK SKSMTAEETL
LNHRLEKDGL EVVETDLGEW IIQLRHEGPS HMVMPAIHLS RYQVAELFSQ VTKHDQSSDI
QRLVKVARRE LRQKYADADM GVSGANFAIA ETGTIGLMTN EGNARLVTTL PRVHVAIAGI
DKLCGTLDDA LKILRVVPKN ATGQAITSYV TWISGANECQ TAPGGKKEMH IIFLDNGRSE
MAKDPLFAQV LRCVRCGACA NVCPVYRMVG GHQMGHIYIG AIGLILTYFF HGKDKAKNLV
QNCINCQACK HICAAGIDLP LLIKEIHARI LDEDGHPLPS MLLGKLLKNR KLFHAFLRTA
KMAQRPLTGG TQYIRHLPHI FSKDHGFKAL PAIAAKPFRD RFAALKPTVS APKFRIALFS
GCVQDFVYPE QLEAAVKVLA AHNVAVDFPM DQSCCGLPLQ MMGEKKAGVD VAKQNIAAMS
GDYDYIITLC ASCASHLKHN YPFLLGENDA EAKAFADKVM PFSAFMTDVL GVTADGFKQT
HERATLHAPC HLCRGMGVVE QPRQLLALGG YEYAQAEQEQ VCCGFGGTYS AKFPGISEQI
LKNKLTDAGR TGAEVLVTEC PGCIMQLRGG AEVNKSGFAV RHIAEVLADH LK