| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1725 |
|---|
| Symbol | |
|---|
| ID | 8377397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 1965208 |
|---|
| End bp | 1968021 |
|---|
| Gene Length | 2814 bp |
|---|
| Protein Length | 937 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645000953 |
|---|
| Product | FAD linked oxidase domain protein |
|---|
| Protein accession | YP_003158232 |
|---|
| Protein GI | 256829504 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.250362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGC CATCCATTCT TGCCGACGCC CTGATCCGCA TCGTCCCTGC AGAACGCCTA
CATCTGGACG CCGTGCGGGT GCGCGTTTTT GCGCTTGACG CCAGCATATA CCAGCCCCGG
GCCCAGGCGG TCATCGACCT TGAGAGCGAG GCCGAAGTGC AGGGCGTGAT GGCGACGCTG
CGCGAACACG GCGGCGGGGT GACCTTTCGT GGAGCGGGCA CGAGCCTCAA TGGCCAGGCC
ACGGGCGAGG ATATCGTGGC GCGCATCCGG GGCCCATTCT GGCGCAAGCA TGAGATCCTG
GACGAAGGAC GGGCCATCCG GCTGCATTGC GGCCTGACCG GCGGGGAAGC CGATGCGCTC
CTGGCTCCGT ACGGGCGGCG CATCGGACCC GACCCAGCTT CGGCGGCAGC CGCGTCCATC
GGCGGCATGG TCGCCAACAA CGCTGCCGGC ATGTGCTGCA CCGTTGATCA GAACACCTTC
GCCACCATGC GCCACATGCG CCTCATCCTG GCCGACGGCA CGATTCTGGA CACCGAAGAC
CCGGACAGCG TGGCCGCGTT TCGCGTCAGC CATGCCCGCG TGCTGGAACG CCTTTCGACC
CTGCGCCGCC AGATCATGGC CGATTCCCCG CTGGTGGAAC GCATCCGGCG CAAGTATTCC
ATCAAGAACA CCACCGGCTA CAGCGTGAAC GCGCTGACCG AATTCGACGA CCCTTTGGAC
ATCCTGACCC ATCTGATGAT CGGCTCCGAA GGAACCCTGG GCTTTGTCAG CTCCGTAACC
CTGGCCACGG TGCCGGTTCA TCCCCTGCGG GCCACGGCGC TGATGATCTT TCCGAACCTT
GACGCGGCGG CGCGGGCGGT CATGGCCCTG CGCGGAGGGT GTCCGGTGCA GGCGGCGGAG
CTTCTGGACC GCACCTCCAT CCGGGCCGTG GAAAACCTGC CCGCCGCCCC GCCGGTGCTG
CGCGAACTGG GCGGGGAAGC CTGCGCCGTG CTCATGGAGA CCAGAGCCGA CGACCCGCAA
ACCCTGACCC GCAACACCGA GGCAATCCTT TCGGCCCTGG ACGGCATCGA ACAGGTCGCA
GCGCCCCGTT TCACCACGGA CGCAGCCGAA TGCGAGCGCC TGTGGAACGT GCGGCGCGGA
CTTTTTTCCG CCGTGACCAG CTTCCGCGCC GCCGACGAAT TCGTCATCAC CGAAGACATC
AACATCCCGG TGGAGCGCCT GGCCGAAGGA TGCGTCGCCT TCCAGCGCCT GTTCGCGCGC
CACGGCTACG ATGCCGGGAT CATGGGACAC GCCTTTCACG GCAATTTTCA CTTCACCCTG
CCCACGCGCA TCAGCGATCC CAAGGAGCTG AAGCGGCTGC ACGGATTCCT GGACGACCTG
GCCGAAGTCA TCACCCGCGA CTTCGACGGG TCGCTCAAGG CCGAACACGG CACGGGCCGG
GCCATCGCGC CCTATGTGCG CCAGGAATGG GGCGACACGG TCTATGCGAT CATGCAGGAG
ATCAAAACCC TGCTCGACCC GCAGGGGATA TTGAACCCCG GCGTCATGTT CAATGAAGAC
CCGCATGAGC ATTTAAAAGG CCTGAAACTG CCCCTGACCA GCCACCCCAA GATCGACATG
TGCGTGGACT GCGGATTCTG CGAGCCGGTC TGCCCTTCGC GGCACATCGC CTTCACCCCG
CGCCAGCGCA TCGCGGCCTG GCGGGAAATC ACCCGTCTGG AACAGGCAGA GTTTTATGAC
GAAGCAAGCA CGTGGCGCGC CGCCTTCACC GAACTGGGCG AATCGACCTG CGCCACGGAC
GGGCTGTGCA CCACTCGCTG TCCCCTGGCC ATCGATGTGG CCTCCTTCAT CCGCGACCTG
CGCCATGTCC GGAACACGCC CGGCACGCGC GCAATAGCGG GCGCGGCGGC CTCGAATTTT
TCAGCGGCGA CAGCCTTGGT TCGAGGAGTG CTGCGCGCGG CCGATCTGGG GCATCTGGCC
TTGGGCGCGG ACACGATGGA GGCCTTAAGC CGCATCCTGA CCCGGATGAG CGGCAAGCGT
CTGCCCCTTT GGCACCAGGC CCTGCCCAAA GCTTCTGCGG CATTGCCCGG GACCGCGCAT
GCCGCCGGCG AAGGGGATGT GGTCGTTTAC CTGCCTTCCT GCGCCACGCG GACCATGGGC
GACACCAGAG GCGACCGCCG GGAGCCCCTG CCCGAGGTCA CGGTGCGACT TTTGGAACGG
GCCGGATTCA CTGTGCGCAT CCCGGAAAAC ATAAACGGGC TGTGTTGCGG CAAGGCCTTT
GAAACCAAGG GGCTTTACGA TCAGGCCCGG ATAAAAATCC TGGAACTGGA AAAGGCGCTG
CGCACAGCCT CCGATAATGG CCGCTACCCC ATCCTCTGCG ACACAAGCCC GTGCCTGGCG
CGCATGAAAA AGGAAATCCC CGGCCTATCC CTTTTTGAAC CCATTGAATT CGCGGGCGCT
TTCCTGCTGC CCCGGCTGCG CTTCACCCCG GTGGACCGCA GCATCGCCCT GCACCCGACC
TGCTCCACCC GCCTCCTGGG CCTGACCGAC GCGTTCACGG ATCTGGCCCG CCATCTGGCA
GCGGACGTCG TCCTGCCCAC GGGCATCCTC TGCTGCGGCT TCTCCGGCGA CAAGGGCTTC
CACCGCCCGG AACTCAACGC CTCGGCCCTG GCAGGGCTGG CAGAGCAGGT GCATGCGTGC
AGCGAAGGAT ATTCCACATC GCGGACCTGC GAGATCGGCC TCAGCCTGCA CGGCGGCATC
CCCTACAGCA GCATCCTCTA TCTGCTGGAA GAATGTTCCA GGCCGGACAA ATGA
|
|---|
| Protein sequence | MSLPSILADA LIRIVPAERL HLDAVRVRVF ALDASIYQPR AQAVIDLESE AEVQGVMATL
REHGGGVTFR GAGTSLNGQA TGEDIVARIR GPFWRKHEIL DEGRAIRLHC GLTGGEADAL
LAPYGRRIGP DPASAAAASI GGMVANNAAG MCCTVDQNTF ATMRHMRLIL ADGTILDTED
PDSVAAFRVS HARVLERLST LRRQIMADSP LVERIRRKYS IKNTTGYSVN ALTEFDDPLD
ILTHLMIGSE GTLGFVSSVT LATVPVHPLR ATALMIFPNL DAAARAVMAL RGGCPVQAAE
LLDRTSIRAV ENLPAAPPVL RELGGEACAV LMETRADDPQ TLTRNTEAIL SALDGIEQVA
APRFTTDAAE CERLWNVRRG LFSAVTSFRA ADEFVITEDI NIPVERLAEG CVAFQRLFAR
HGYDAGIMGH AFHGNFHFTL PTRISDPKEL KRLHGFLDDL AEVITRDFDG SLKAEHGTGR
AIAPYVRQEW GDTVYAIMQE IKTLLDPQGI LNPGVMFNED PHEHLKGLKL PLTSHPKIDM
CVDCGFCEPV CPSRHIAFTP RQRIAAWREI TRLEQAEFYD EASTWRAAFT ELGESTCATD
GLCTTRCPLA IDVASFIRDL RHVRNTPGTR AIAGAAASNF SAATALVRGV LRAADLGHLA
LGADTMEALS RILTRMSGKR LPLWHQALPK ASAALPGTAH AAGEGDVVVY LPSCATRTMG
DTRGDRREPL PEVTVRLLER AGFTVRIPEN INGLCCGKAF ETKGLYDQAR IKILELEKAL
RTASDNGRYP ILCDTSPCLA RMKKEIPGLS LFEPIEFAGA FLLPRLRFTP VDRSIALHPT
CSTRLLGLTD AFTDLARHLA ADVVLPTGIL CCGFSGDKGF HRPELNASAL AGLAEQVHAC
SEGYSTSRTC EIGLSLHGGI PYSSILYLLE ECSRPDK
|
|---|
| |