Gene Dbac_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1716 
Symbol 
ID8377388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp1953802 
End bp1954890 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content68% 
IMG OID645000944 
Productcobalamin biosynthesis protein CbiD 
Protein accessionYP_003158223 
Protein GI256829495 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1903] Cobalamin biosynthesis protein CbiD 
TIGRFAM ID[TIGR00312] cobalamin biosynthesis protein CbiD 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.3857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGC GTCATGGCTT CACCACGGGC ACGGCGGCCG CCGCCGCCGC CAAGGCCGCG 
ACGCTGCGCC TGCTCACGGG CCGCGCCCAG GACAGCGTGG AAGTGCCGCT GCCCGTGGGC 
CAGCGCATGA CCATCACCAT CCTTGAAAGC CGGGTCGACG GGGAAGGCAT CATGGCCGCC 
GTGGTCAAGG ACGGCGGCGA CGACCCGGAC GTGACCCACC GCGCCGTGAT TCGGGCGCGG 
GTGCGGCGCG GCGTAGGGGA TGGCGTCGTT TTGCGCGGCG GGGCAGGCGT TGGCGTCGTG 
ACCAGGCCGG GCCTGCCCGT TCCCGTCGGC ATGCCCGCCA TCAATCCCGT GCCCCGCCAG 
CAGATCACCC TGGCCGTGAC CGAGGCCATG GCCGCTGCCT GCGGCATGAA CGAAAAAGTG 
AGTCTGGAAG TGGAAATCAG CGTGGATCGC GGGGAAGAAC TGGCCCAAAA AACCTTCAAT 
CCGCGCCTGG GCATCATCGG CGGTATCTCC ATTCTCGGCA CCCGGGGCAC GGTCAAGCCC 
TTCAGCAACG CGGCCTACCA GGCCACAATT CGCCAGTGTC TGGATGTCAT GCAGGCCTGC 
GGAGCGCGCA CCCCCTGTCT GACCACGGGC GGACGCAGCG AACGCTTCCT GCGTCAGGCC 
CGCCCCCGGA CGCCGGAAAC CGCGTGCGTG CAGGTGGCCG ATTTTTTTGC CTACAGCATG 
AAGGAAGTCG GGCGGCGCGG CTTTGATTCC GTGCTCTGGG GCGTCTTTTT CGGCAAGCTG 
GTCAAGCAGG CCCAGGGACA CCGCTACACC CACGCCCGCA GCGCGGAGCT TGACCTGACC 
ATCCTCGCGG GCTGGTGCGC GGATTGCGGC TTCGACCGCC ACGTCTGCCA GAAGGTCGCC 
GGCGGCAACA CGGCCATGCA GGCCCTGGAG CTTCTGGCTC CCCTGCCGCA AAGCGCAACC 
CTCTTCGCCC TGCTCACGGA CAAGGCTGCG GCCGCAGCCC GCCTCTTTTG CGGGCGAGAG 
GTGGGCGTTG ACTACATGCT TTTCGATTTT TCCGGCCAGA TTCTGCACCA AACCTCGGAG 
GCCGCATGA
 
Protein sequence
MTLRHGFTTG TAAAAAAKAA TLRLLTGRAQ DSVEVPLPVG QRMTITILES RVDGEGIMAA 
VVKDGGDDPD VTHRAVIRAR VRRGVGDGVV LRGGAGVGVV TRPGLPVPVG MPAINPVPRQ 
QITLAVTEAM AAACGMNEKV SLEVEISVDR GEELAQKTFN PRLGIIGGIS ILGTRGTVKP 
FSNAAYQATI RQCLDVMQAC GARTPCLTTG GRSERFLRQA RPRTPETACV QVADFFAYSM 
KEVGRRGFDS VLWGVFFGKL VKQAQGHRYT HARSAELDLT ILAGWCADCG FDRHVCQKVA 
GGNTAMQALE LLAPLPQSAT LFALLTDKAA AAARLFCGRE VGVDYMLFDF SGQILHQTSE 
AA