Gene Dbac_1699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1699 
Symbol 
ID8377371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1934574 
End bp1935773 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content53% 
IMG OID645000928 
ProductO-antigen and teichoic acid-like export protein 
Protein accessionYP_003158207 
Protein GI256829479 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0654508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGATC AGGCCCTCTT TGCCGGAGCC AATTTTCTGG TCAGCATCCT CCTGGCCCGC 
TGGCTGGAAC CGGCAGCATA CGGGGCCTTT TCCTTGGCCT ATGCAATCTT CCTGCTGCTC
GGCACCGTGC ATACGGGCCT CTGGACCGAA CCCATGCTGG TCTACGGCTC GGGACGCTTC
CGCGAGGCTT TCACCTCATA TCAACGGATT CTCCTGCGCT CCCACTGGCG TTTCGGGGGC
GCTGCATGTC TTTTCTTTCT CGTGCTGCAT CTGGGATTTT GGGTCTGCGG AGCACGTGAA
ATCGCGCTGA GCTTCCTTGG ACTCTCCCTC GCGGCCCCGA CCGTGCTGTA TTTATGGCTC
GTGCGCAGGG GGGCATACGT GCTTCTGAAA CCACGCCTGG CCGCCCTGGG CGGAGGGTTT
TACCTCCTCC TCTACCTGGC CCAGACGTTC TTCTTTTTAC GCACGAACAC ACTCAACACC
TTCACCGCGC TCCTGGCCAT GGCCGTGGCC GGCCTCGTTT CGGCGGAAAC TATCCGATGG
CGCATGAATA CAGAAACCGA GCAGGTCGTG GATGCAGAGG AAGTGCACAA CCTGCATTGG
CACTACGGAC GCTGGGCACT GCTGGCGGGA ATATTTTCCT GGGTGCCGGG AAATATCTTC
TATCTCATCC TGCCCGCATT TCATGGCTTT GAGGCCGCAG CGCATTTCAA AGCACTCATG
AACCTGCTGA TGCCGATTCT CCACGTTAAC GGAGCCCTGG GACAACTTCT GGTGCCGGGG
ATGGTGCGGG CCGTGGATCA AGGCAAGCTT CTACCATTTG CATTAGCCAA CCTGGCGGTC
CTTTCGACAC TTGCTTCGCT CTATTGGCTC TTACTCATCG CCATGGGTCC ACAATTCATG
GAGTGGATGT ATGGTGGGAA ATACACTCAT GATGCAGACT GTCTCCTCTG GCTTGGCCTG
TTGCCGGTTT TGGCGGGCGC CGTCTCGGTC ATGAATTCAA TGCTCCGGGC ATTGGAGAAA
TCAGATGCTG TAGCCCGTGC GTATGCGCTT ATGGCCGGAT TTTCGTGTAT AGTTGGATTA
TTTTTAATCT CAAATACAAA AATTCAAGAT GTATTTTTAT TATATTTCTT TACATATATT
TTTGGAATTA TAATTTTTTA CTCATACACA AATAAACTAA ATATTCATAT CACAAACTAA
 
Protein sequence
MTDQALFAGA NFLVSILLAR WLEPAAYGAF SLAYAIFLLL GTVHTGLWTE PMLVYGSGRF 
REAFTSYQRI LLRSHWRFGG AACLFFLVLH LGFWVCGARE IALSFLGLSL AAPTVLYLWL
VRRGAYVLLK PRLAALGGGF YLLLYLAQTF FFLRTNTLNT FTALLAMAVA GLVSAETIRW
RMNTETEQVV DAEEVHNLHW HYGRWALLAG IFSWVPGNIF YLILPAFHGF EAAAHFKALM
NLLMPILHVN GALGQLLVPG MVRAVDQGKL LPFALANLAV LSTLASLYWL LLIAMGPQFM
EWMYGGKYTH DADCLLWLGL LPVLAGAVSV MNSMLRALEK SDAVARAYAL MAGFSCIVGL
FLISNTKIQD VFLLYFFTYI FGIIIFYSYT NKLNIHITN