Gene Dbac_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1678 
Symbol 
ID8377350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp1911513 
End bp1912151 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content55% 
IMG OID645000907 
Productouter membrane lipoprotein carrier protein LolA 
Protein accessionYP_003158186 
Protein GI256829458 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID[TIGR00547] periplasmic chaperone LolA 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGCGCT TTTTTATGGG GCTTCTCTTC GTCCTGACCA GCGTTTGGTG CGCACAGGCT 
GCGGATTTGA GCGATCAGAT CCAAAAGCGA TATGATACAT TGCAGTCTTT TAGAGGGTTT 
TTTCTGCAGA AGCTGACCAA TGCCTCCAGC CACGAAGTGC AGGAGCGGCT TGGCAGCATC 
ACCTTCAAAC GCCCCCGCTT CATCCGCTGG GAAACGACCA GCCCCGAGAA TGAGCTGCTC 
ATCATCGGGC AGGACACGGT CTGGGAATAT TTTCCCGCAG AGGAGACTGT CTACCGCTAC 
TCGGTGGAGC AGGTTTTAAG TTCCAAGACC ATGATCCGTT TCCTGTCCGG CGAGGCCAAC 
CTGAAGGACG ACTTCATCGT GCAGGATCTG GGCGCGGACG GGGATTTCAG GCATTTGAAG 
ATCATCCCCA AGGAGCCCGA GCCCAATCTG GTCGAGGGAG AACTCTGGGT CCGGCCCGGC 
CAGGATATGC TGGAGAAGAT CAAGCTGGTG GATTTCTTCG GAAATATCAA TGAATTGGAA 
CTGACCGGAA TTGAGATTGA CGTGCCCGTG GAAGACAAGG AATTCACCCT GGTGCCGCCC 
AAGGGCACGG ACGTGATCGA AGGGCTTGTC GGAGAGTGA
 
Protein sequence
MPRFFMGLLF VLTSVWCAQA ADLSDQIQKR YDTLQSFRGF FLQKLTNASS HEVQERLGSI 
TFKRPRFIRW ETTSPENELL IIGQDTVWEY FPAEETVYRY SVEQVLSSKT MIRFLSGEAN 
LKDDFIVQDL GADGDFRHLK IIPKEPEPNL VEGELWVRPG QDMLEKIKLV DFFGNINELE 
LTGIEIDVPV EDKEFTLVPP KGTDVIEGLV GE