Gene Dbac_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1628 
Symbol 
ID8377300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1841429 
End bp1844641 
Gene Length3213 bp 
Protein Length1070 aa 
Translation table11 
GC content61% 
IMG OID645000857 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_003158136 
Protein GI256829408 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGCAA CCATTTCCCT GCAGCGTCAG CTCGACCACC TGAACCGCGC CCAGCGTCAC 
GCTGGCATCG GCTCCTTCGA ACACGACTTT TCAAGCGGCG CGACCTTCTG GTCCGACGAA
CAGTATCGTC TGCTCGGATT CTCGCCCGAT GAGACGCTTC CATCCCTGGA CCGCTTCCTT
GAACTGCTTG ATCCCCGGGA CCGGGACCGT TTCCTGCGCA AGGTCGGAGT CTGTTTCACC
AAGCGGCGCG AACTGCGTAC CGAAGTGCGC TACACCCCGA AAAGCGGCAA ACTTCGCACC
GCCCAGATCC GCGCCGAATT CGAACCCGAC GAGAGCGGCC GGATTCGCGT CATCTCCGGC
ACATTTCAGG ACGTGACCGA GCGCAGAGCC GTGCAGTCGG CGTTGCGTCA GAGCGAAGCC
GGCTACCGGA CCATCTTCGA AAACGCCCTG GAAGGAATCT ACCAGTCCAC CCCCGGCGGC
ACATTTCTGA GCGTCAACGC CTCCATGGCC AAAATCCTGC GCTACGACGA TCCCGCCGAC
CTGATGGCAA GCATCAAGGA CATCGGCCAC GATCTTTACG CCGACCCCTG CGACCGCAAG
CGCTACATGG AACTTCTGGA AGAGCATATC CGGGTCATGG GCTTCGAGAC GCAGGTGCGG
CGCAAGGACG GCAGCCTTAT CTGGGTGACC CTCAACTCCA CCCTGATCCG GGACGCGGGC
GCCAACCGGC CCTGTCTGAT CGGAACCATG GAAGACATCA GCACGCGCAA GCGCTTTGAA
CTGTCGCTGA TCGAATCGGA CCAGCGCTTT CGGAACCTGC TGCAACAGAT AAGCTGCATC
GCCGTGTCGC TGGACAATCA AAGCCGGATC GTCTTTTCCA ATCCTTTTCT GCACCAGCTG
ACCGGGTGGA GCGAGGCGGA ACTGAACGGC CAAAACTGGT TCGACGTATT TCTCCCCGCC
GGACAGCGCG AAACCATGAG CAGGGTTCTC ACGCCTCACC CCACGGCGGC CACGCACGGG
TCGGAATCCA TGGACACGGA AATCCGGACC CGCCAGGGGG CGCTGCGCCT CATCCGCTGG
AACACCGTGC CGGACATCAA CGTGCAGGGC GAGATCATCG GGGTTACCTG TCTGGGCGTG
GATATCACCG CCATCAGGAT GGCCCGCGAC ACCTTGAGCA AGAGCGCGCA GATGCACTCC
ATGCGCCTGC GCATCGACGA CGCGGCCCAT TCCACCCCGG ATTTTGCCAC CCTCATGCGC
ACCGTCCATG AAATTCTGGG CGAAGTCATC GACGCCAAGA ATCTGATCAC GGCCCTGATC
AACACGGACA AGAATTCACT GGAATTTCCC TACTGGGTCG ATGAAATGAC CGATGTCAGC
GAAGCGGCCC CACGCATCGA CGATCTGAAC GACCCTGAAA ACCGTCGCCT GACCCTGGAG
CTCTTGCGCG GCAATATTCC CAATATTTTG AGCAGCAGCG ACATGACCGC CTTGGCCGAG
GCGGGAAAAA TCCGTCTGGT GGGCGTCATC CCCCAGAGCT GGATGGGCGT GCCCCTGAAG
GTGCGCGGCA AGGGCATCGG GGCGCTCATC GTGCAAAACT ACGCAACTCC GAAACACTAC
ACCCGGAACG ATCTGGACAT CCTGCTCGAG GTCTCAGAAC AGATCGCTCT GGCCATCGAG
CGCCAGCGCC ACGACGAGCT TTCCCAGACC GCCGAGGAAA TCTTTCACGA CATTCCTTCG
GGTCTTTTCA TCTACAAATA CCGGGAACCG GACCAGCTGA TCCTGGAAAG CGCCAACCCG
GCCGCGCTGC GCCTTATCGA CAAACGTCTT GAAGAGGCCC GCGGCACGCT CTTCACGGAC
ATCTGGCCCC GAGCCACCCT GCAAAGCAAT TATCTGCGCT GCCTGCACAC CAAGGAGCCC
TTCGACAAGG AAGCGCACCT CTACGAGGAC GAACGCATCC GGGGCTATTT CCGTATTCAC
GCCTTCCCCC TGCCCGGGGA AAAGGTGGCC GTGGCCTTCG AGGACGTCAC CGAACGCCAG
CAGGTCCAGC AGGCCTTGGT CCGCGCCAAG GAGATCGCCG AATCGGCCAA CAGGGCGAAA
AGCGAATTCC TGGCCAACAT CAGCCACGAG GTGCGCACCC CCTTGAACGG GATCATGGGC
ATGTTGCAGC TGGCCATGCA GTCGGAGGTA CCGCCGGAGC TGGAGGATTA CATACGCACG
GCCCTGGAAT CGTCGCGCAA CCTGCTGCGA GTGTTGAACG ATGTGCTCGA TTTCACCAAG
GTCGATGCGG GAAAAATGGA AATTGTGGAC CGGGATTTCA GCCTGGACGA CCTGTTGTCC
CAGGCCGTGA ACTTTTTCAG GGCCCTGGCC ATGGACAAGA AAATCAGCCT CGTGCTCTCG
GCCCCGCGCG ATATCGGCAG ATTTGTCGGG GACGAGGGGC GCCTGCGCCA GATCCTCTTC
AACCTGATGG GCAACGCCCT CAAGTTCACC GACACGGGCA GCGTAACCCT TGAAGCCTGG
CCTGTGGGCG AGCAGGGAGA TGCGACGCGC ATCCTCTTCG CCGTCAGGGA CGAAGGGATC
GGTATCCCCA CGGACAAACT GGGTTATGTC TTCGAATCCT TCACGCAGGT CGACGGCACC
TATTCGCGGC GCTACCAGGG GACAGGTCTG GGACTGCCCA TCGTCAAACG GCTGGTGACG
CTCATGGGCG GCAACATATC GGTGGAGAGC ATGGAAGGCG AAGGCACGAC CATCTTCTTC
GTCCTCCCCC TGCGGGCGGC CCCGCCGCTC CAGCAGGTAC AGACGTCGGC GCAGCCCGAG
CTTGCCATGA CCGCTGTGCG CCCGCTTGGC ATTCTGCTGG TGGAGGATGA CGTGGTGAAC
ATGACCATGG CCAGGCGGAT GCTGGAAAAA ATGGGACACA GCGTCATCTG CGCCCGCAAC
GGCCAGGAAG CCCTCGATAC GCTGCAGGCT CCGGGCGTTG ATCTGGTGCT CATGGACATC
CAGATGCCGG AAATGGACGG AATCGAGGCC ACGGAGATTG TCCGCAACGA TCCCCTCTTC
ACGCCCTACG CCCGAGTCCC CATCATTGCC CTGACCGCCC ACGCCATGGG CGGCGACGAG
GAAAAATTCC TGTCGCACGG CATGGACGCC TATCTCTCCA AGCCCTTCGA TCATGCCCGC
CTGCAGGAGC TGTTGCACCG CTTTTTCGGC TGA
 
Protein sequence
MPATISLQRQ LDHLNRAQRH AGIGSFEHDF SSGATFWSDE QYRLLGFSPD ETLPSLDRFL 
ELLDPRDRDR FLRKVGVCFT KRRELRTEVR YTPKSGKLRT AQIRAEFEPD ESGRIRVISG
TFQDVTERRA VQSALRQSEA GYRTIFENAL EGIYQSTPGG TFLSVNASMA KILRYDDPAD
LMASIKDIGH DLYADPCDRK RYMELLEEHI RVMGFETQVR RKDGSLIWVT LNSTLIRDAG
ANRPCLIGTM EDISTRKRFE LSLIESDQRF RNLLQQISCI AVSLDNQSRI VFSNPFLHQL
TGWSEAELNG QNWFDVFLPA GQRETMSRVL TPHPTAATHG SESMDTEIRT RQGALRLIRW
NTVPDINVQG EIIGVTCLGV DITAIRMARD TLSKSAQMHS MRLRIDDAAH STPDFATLMR
TVHEILGEVI DAKNLITALI NTDKNSLEFP YWVDEMTDVS EAAPRIDDLN DPENRRLTLE
LLRGNIPNIL SSSDMTALAE AGKIRLVGVI PQSWMGVPLK VRGKGIGALI VQNYATPKHY
TRNDLDILLE VSEQIALAIE RQRHDELSQT AEEIFHDIPS GLFIYKYREP DQLILESANP
AALRLIDKRL EEARGTLFTD IWPRATLQSN YLRCLHTKEP FDKEAHLYED ERIRGYFRIH
AFPLPGEKVA VAFEDVTERQ QVQQALVRAK EIAESANRAK SEFLANISHE VRTPLNGIMG
MLQLAMQSEV PPELEDYIRT ALESSRNLLR VLNDVLDFTK VDAGKMEIVD RDFSLDDLLS
QAVNFFRALA MDKKISLVLS APRDIGRFVG DEGRLRQILF NLMGNALKFT DTGSVTLEAW
PVGEQGDATR ILFAVRDEGI GIPTDKLGYV FESFTQVDGT YSRRYQGTGL GLPIVKRLVT
LMGGNISVES MEGEGTTIFF VLPLRAAPPL QQVQTSAQPE LAMTAVRPLG ILLVEDDVVN
MTMARRMLEK MGHSVICARN GQEALDTLQA PGVDLVLMDI QMPEMDGIEA TEIVRNDPLF
TPYARVPIIA LTAHAMGGDE EKFLSHGMDA YLSKPFDHAR LQELLHRFFG