Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1611 |
Symbol | |
ID | 8377283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1825984 |
End bp | 1827738 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645000841 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003158120 |
Protein GI | 256829392 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.187495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGCAG AGGCGATAAA CAAGGTCTGG CTCAAGCACT ATGATCAGGA AGTCAGTCCG AGCCTGGACT ATGAAACCGT TCCGCTCTTC GAAATTCTGG AGCGTGCGGC GGCCAGCTAT CCGGACCGTC CAGCCATAGT CTTCAACAAC TGGAGCGTGA GCTACAAAAA GCTCAAGCGT CTGGTGGATC TTGCCGCTGC CAACCTGAAA AAGGCCGGGG TCAAACCCGG TGAGCGGGTG GCCATCATGC TGCCCAACTG TCCGCAGACG GTCATCACCT ACTGGGCCTG CCTCAAGCTC GGGGCCGTGG TCGTCATGAC CAATCCCTTG TACATGGAGA AGGAGCTGCT CCATCATTTC AACGATTCCG AGGCCAAAAC CCTCATCACG TTGAATCTGC TCTGGAAACG CGTGGACGCC CTGCGCTCCA GGCTGCACCT GCGGCGCATC TTCGTGACCT CCATCGCCGA CTGTCTGAGC TTTCCGCTAA GCGTCCTCTA CACGCTCAAA TCCAGGCGCG AATACAAGCT CGAACCCATC CCGTACGACA GCACGCACGT GCTGCCCTGG AAAGGACTTC TCAAGCGGGC GACCATCGAA CCGCCCCATC CCGTCGATCC CGTGAAGGAT CTGGCTGCGC TGCAATACAC CGGCGGCACC ACGGGCGTGT CCAAGGGCGT CATGCTGACC CATGCCAATC TGGGCTACAA CGCCCAGCAG GCCCGGGCCA TCCTGCACAC CATCAAGGAC TCGGGCGAGG TCATGCTCGG CCTTTTGCCT TTTTTTCACA TTTACGGGCT GACTGTCTGC GTCAATTTCG GCACCCTCAT CGGCGCGACG CTGGTACCCA TGGCCAAGTT CGTGCCTCTG GACGTGCTTA AGACCATCCA CAAGAAAAGA CCGACCATCT TTCCCTGCGC GCCGTCGATC TTCATCGCCC TCTTGCAGCA GAAGAACCTG CACAAATATG ATCTTTCCTC CGTGCGCTAC TGCATCTCCG GCTCCGCGCC CATGCCTGTG CCGATCATGG AAAAATTCAA CAGCCTGAGC AACGGGGCCA ACATCATCGA AGGCTTCGGC CTGACCGAAG CGTCGCCCAT CACGCACCTC AATCCCCTGC GCGGCAACAG CAAGAACGGC TCCATCGGTC TGCCCTTTCC CGACACCGAC GCCGCCATCG TGGACATGGA AGTAGGTTCC CTGCCGCTGC CCGTGGGCAA GATAGGAGAA CTTGTCGTGC GCGGCCCGCA GGTCATGCAG GGCTACTGGA AACGCCCCGA CGAGACGGCC AGCGTGCTCA GAAACGGCTG GCTCTATACC GGCGACATCG CGTACATGGA CGAGGACGGC TTTTTTTTCA TCGTCGACCG CAAGAAGGAT CTGATCATCA CCGGCGGGTA CAACGTCTAC CCGCGCGAAA TCGACGAAGT GCTGCATGAA CACCCGGCCA TCAAGGAGGC CGTCAGCGTG GGCATCACGC ACAAGACCCG CGGCGAGATC ATCAAAGCCT ACATCGTGCT GCGCGAGGGC GAGAGCCTGA CCAAAGCCGA CGTCATCGCC TTCTGCAAGG AGAAGCTGGC CAATTACAAG GTGCCGAAAC AGGTCGAGTT CAGGGACGAT CTGCCCAAGA GCATCGTCGG CAAGGTCCTG CGCCGGGTCA TCCGCGAAGA AGAGGACCGC AAGGCTCACG ATCATTGCGA GTGCAACGGA AACGGTGAAG ACATTGAAGC AAACGGCGAC GAGAAGGATC GATAG
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Protein sequence | MIAEAINKVW LKHYDQEVSP SLDYETVPLF EILERAAASY PDRPAIVFNN WSVSYKKLKR LVDLAAANLK KAGVKPGERV AIMLPNCPQT VITYWACLKL GAVVVMTNPL YMEKELLHHF NDSEAKTLIT LNLLWKRVDA LRSRLHLRRI FVTSIADCLS FPLSVLYTLK SRREYKLEPI PYDSTHVLPW KGLLKRATIE PPHPVDPVKD LAALQYTGGT TGVSKGVMLT HANLGYNAQQ ARAILHTIKD SGEVMLGLLP FFHIYGLTVC VNFGTLIGAT LVPMAKFVPL DVLKTIHKKR PTIFPCAPSI FIALLQQKNL HKYDLSSVRY CISGSAPMPV PIMEKFNSLS NGANIIEGFG LTEASPITHL NPLRGNSKNG SIGLPFPDTD AAIVDMEVGS LPLPVGKIGE LVVRGPQVMQ GYWKRPDETA SVLRNGWLYT GDIAYMDEDG FFFIVDRKKD LIITGGYNVY PREIDEVLHE HPAIKEAVSV GITHKTRGEI IKAYIVLREG ESLTKADVIA FCKEKLANYK VPKQVEFRDD LPKSIVGKVL RRVIREEEDR KAHDHCECNG NGEDIEANGD EKDR
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