Gene Dbac_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1611 
Symbol 
ID8377283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1825984 
End bp1827738 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content59% 
IMG OID645000841 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003158120 
Protein GI256829392 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.187495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCAG AGGCGATAAA CAAGGTCTGG CTCAAGCACT ATGATCAGGA AGTCAGTCCG 
AGCCTGGACT ATGAAACCGT TCCGCTCTTC GAAATTCTGG AGCGTGCGGC GGCCAGCTAT
CCGGACCGTC CAGCCATAGT CTTCAACAAC TGGAGCGTGA GCTACAAAAA GCTCAAGCGT
CTGGTGGATC TTGCCGCTGC CAACCTGAAA AAGGCCGGGG TCAAACCCGG TGAGCGGGTG
GCCATCATGC TGCCCAACTG TCCGCAGACG GTCATCACCT ACTGGGCCTG CCTCAAGCTC
GGGGCCGTGG TCGTCATGAC CAATCCCTTG TACATGGAGA AGGAGCTGCT CCATCATTTC
AACGATTCCG AGGCCAAAAC CCTCATCACG TTGAATCTGC TCTGGAAACG CGTGGACGCC
CTGCGCTCCA GGCTGCACCT GCGGCGCATC TTCGTGACCT CCATCGCCGA CTGTCTGAGC
TTTCCGCTAA GCGTCCTCTA CACGCTCAAA TCCAGGCGCG AATACAAGCT CGAACCCATC
CCGTACGACA GCACGCACGT GCTGCCCTGG AAAGGACTTC TCAAGCGGGC GACCATCGAA
CCGCCCCATC CCGTCGATCC CGTGAAGGAT CTGGCTGCGC TGCAATACAC CGGCGGCACC
ACGGGCGTGT CCAAGGGCGT CATGCTGACC CATGCCAATC TGGGCTACAA CGCCCAGCAG
GCCCGGGCCA TCCTGCACAC CATCAAGGAC TCGGGCGAGG TCATGCTCGG CCTTTTGCCT
TTTTTTCACA TTTACGGGCT GACTGTCTGC GTCAATTTCG GCACCCTCAT CGGCGCGACG
CTGGTACCCA TGGCCAAGTT CGTGCCTCTG GACGTGCTTA AGACCATCCA CAAGAAAAGA
CCGACCATCT TTCCCTGCGC GCCGTCGATC TTCATCGCCC TCTTGCAGCA GAAGAACCTG
CACAAATATG ATCTTTCCTC CGTGCGCTAC TGCATCTCCG GCTCCGCGCC CATGCCTGTG
CCGATCATGG AAAAATTCAA CAGCCTGAGC AACGGGGCCA ACATCATCGA AGGCTTCGGC
CTGACCGAAG CGTCGCCCAT CACGCACCTC AATCCCCTGC GCGGCAACAG CAAGAACGGC
TCCATCGGTC TGCCCTTTCC CGACACCGAC GCCGCCATCG TGGACATGGA AGTAGGTTCC
CTGCCGCTGC CCGTGGGCAA GATAGGAGAA CTTGTCGTGC GCGGCCCGCA GGTCATGCAG
GGCTACTGGA AACGCCCCGA CGAGACGGCC AGCGTGCTCA GAAACGGCTG GCTCTATACC
GGCGACATCG CGTACATGGA CGAGGACGGC TTTTTTTTCA TCGTCGACCG CAAGAAGGAT
CTGATCATCA CCGGCGGGTA CAACGTCTAC CCGCGCGAAA TCGACGAAGT GCTGCATGAA
CACCCGGCCA TCAAGGAGGC CGTCAGCGTG GGCATCACGC ACAAGACCCG CGGCGAGATC
ATCAAAGCCT ACATCGTGCT GCGCGAGGGC GAGAGCCTGA CCAAAGCCGA CGTCATCGCC
TTCTGCAAGG AGAAGCTGGC CAATTACAAG GTGCCGAAAC AGGTCGAGTT CAGGGACGAT
CTGCCCAAGA GCATCGTCGG CAAGGTCCTG CGCCGGGTCA TCCGCGAAGA AGAGGACCGC
AAGGCTCACG ATCATTGCGA GTGCAACGGA AACGGTGAAG ACATTGAAGC AAACGGCGAC
GAGAAGGATC GATAG
 
Protein sequence
MIAEAINKVW LKHYDQEVSP SLDYETVPLF EILERAAASY PDRPAIVFNN WSVSYKKLKR 
LVDLAAANLK KAGVKPGERV AIMLPNCPQT VITYWACLKL GAVVVMTNPL YMEKELLHHF
NDSEAKTLIT LNLLWKRVDA LRSRLHLRRI FVTSIADCLS FPLSVLYTLK SRREYKLEPI
PYDSTHVLPW KGLLKRATIE PPHPVDPVKD LAALQYTGGT TGVSKGVMLT HANLGYNAQQ
ARAILHTIKD SGEVMLGLLP FFHIYGLTVC VNFGTLIGAT LVPMAKFVPL DVLKTIHKKR
PTIFPCAPSI FIALLQQKNL HKYDLSSVRY CISGSAPMPV PIMEKFNSLS NGANIIEGFG
LTEASPITHL NPLRGNSKNG SIGLPFPDTD AAIVDMEVGS LPLPVGKIGE LVVRGPQVMQ
GYWKRPDETA SVLRNGWLYT GDIAYMDEDG FFFIVDRKKD LIITGGYNVY PREIDEVLHE
HPAIKEAVSV GITHKTRGEI IKAYIVLREG ESLTKADVIA FCKEKLANYK VPKQVEFRDD
LPKSIVGKVL RRVIREEEDR KAHDHCECNG NGEDIEANGD EKDR