| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1602 |
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| Symbol | |
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| ID | 8377273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 1817475 |
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| End bp | 1818944 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645000831 |
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| Product | Nodulation efficiency protein NfeD |
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| Protein accession | YP_003158111 |
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| Protein GI | 256829383 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATTT ACCGAAGCTC CAATTCCTTC CGTATTCTCG GCGTACTGGC GGCCCTTATT
CTGGCCGTGC TGGCAGGTTT TGTTTTTGCG CAGGAGGCGG ACACGGGGCG GCGGGGGTAT
GTTCTGACCG TTGATGATGC CATCGGACCC GCCACCCGCG ACCACATTGT GCGCAACATC
ACGCGTGCCG AGAAAGAGGG CGCGGAGGTG GTCGTGTTGC GTCTGAACAC TCCTGGCGGA
CTTGATGCTT CCATGCGCGA CATCATCCGC AAGATTTTGG CCTCCGAAGT GCCGGTGGTG
ACCTGGGTCG CGCCGGCCGG ATCCCGTGCC GCCAGTGCCG GAACGTACAT CATGTACGCC
AGTCACATCG CGGCCATGGC CCCGGCCACC AATCTCGGCT CGGCCACGCC GGTGCAGATC
GGGGGCGGCG AGAGCGACAA ATCGCCATCG AGCTGGGAGC GTGCCCGGGA GGCGATGGAA
AAAATGCGGG ATGGGGATGA AGGCGCCAAC GCTACGGAGC AGCCGGAAAA TCTGCCCGAA
GAGCCGGAAA ACCTGCCCGA CGACGCCATG GGGCGCAAGG TCGTCAATGA CGCCGTGGCC
TACATCAAGG GTCTGGCCGA GCGTCACGCC CGCAATGCCG AGTGGGCCGA GCGCGCGGTG
CGCGAAGCGG TCAGCCTGAC GGCCTCCGAG GCCCTGGAGC AGAGGGTTGT GGATGTTGTC
GCGGCCAACC TGCCCGAGCT TCTCGAAGCC ATCGACGGTC GCGAGGTGCG CATGGAGAAC
GGCACGCGCA CCCTGCAAAC GGCAAATCTT GCCACCGTCG AGATCGAAAC CGACTGGCGC
ACCGAACTGC TGGCCATCAT CACCAACCCG ACCCTGGCCT ACATGCTGCT GATGGTGGGC
ATCTACGGCC TGATTCTCGA GGGCTACAAC CCGGGCGCCA TGGTGCCCGG GGTAATCGGC
GGCATCTGCC TGTTGCTGGC GCTGTACGCC TTCCAGATCC TGCCCGTGAA CTTCGCCGGG
CTTGCGCTCA TTTTGCTCGG AATGGCGCTG ATCGGGGTGG AGCTTTTCAT TCCGGCCTTC
GGCATCCTTG GGATCGGGGG CATTGTCGCG GTGGTGGCTG GTTCGGTCAT TCTTTTCGAG
GGCGACATGC CCGAATTCCG CATCAACACA TATGCAATTG TCGGCATGGG AGCCGGCTCT
GCTCTGCTCT TCGGCGGCAT CGTCTGGGTG GCCGCACGCA CGTTGCGAAA ACCGCGGCTC
AGCAGCCGCG AGGCAATGGT CGGCCTTGAA GCCGAAGCCA TTCAGGATTT TATCGACGGA
CTCGGGAGGG TGCATCTGCA GGGCGAGAAC TGGTCGGCCA GGTCAGGGCA TCCGATCCGT
CAGGGCGACA AGGTCCGCGT TATCGCCATG GAAGAGGAGG GGCTTGTCCT TTCCGTGACC
AAGGCGCCGA CCGACAACGA CAAACACTAA
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| Protein sequence | MSIYRSSNSF RILGVLAALI LAVLAGFVFA QEADTGRRGY VLTVDDAIGP ATRDHIVRNI
TRAEKEGAEV VVLRLNTPGG LDASMRDIIR KILASEVPVV TWVAPAGSRA ASAGTYIMYA
SHIAAMAPAT NLGSATPVQI GGGESDKSPS SWERAREAME KMRDGDEGAN ATEQPENLPE
EPENLPDDAM GRKVVNDAVA YIKGLAERHA RNAEWAERAV REAVSLTASE ALEQRVVDVV
AANLPELLEA IDGREVRMEN GTRTLQTANL ATVEIETDWR TELLAIITNP TLAYMLLMVG
IYGLILEGYN PGAMVPGVIG GICLLLALYA FQILPVNFAG LALILLGMAL IGVELFIPAF
GILGIGGIVA VVAGSVILFE GDMPEFRINT YAIVGMGAGS ALLFGGIVWV AARTLRKPRL
SSREAMVGLE AEAIQDFIDG LGRVHLQGEN WSARSGHPIR QGDKVRVIAM EEEGLVLSVT
KAPTDNDKH
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