| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1589 |
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| Symbol | |
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| ID | 8377260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1805456 |
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| End bp | 1807357 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645000818 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_003158098 |
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| Protein GI | 256829370 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000238856 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCGA ATACCAATTG CGGCGTGCTG CCTCTTGAGG CCATGGACAG CCCCTCCGCA
TTCAAAAACA TATGGGGCTG GCTGAACGAG AATTTCGAAA AGGTCTTTCT TGTCTCCGGA
TTGCTGACGA TCATTTTCCT GATCACCTTT CAGACGCTGT ACAGATACAT CATCGTGCAT
TTCGTCAGCT CGGCGGGCGC GGCGGTCTGG ACCGAGGAAC TGGCGCGCTA CATCTTCATC
TGGATCAGCT ATCTCGCGCT CTCCGTCGCG ATCAAGAAGC GCAGCTCGAT CCGCATCGAC
ATCATTTACG ACCGGATTCC GGTCCGCTGG CAGAATGCGA GCTGGGTCGT GGTCGACATC
TTTTTCCTGA TCCTCACGCT GACCATCTGC TGGTACGGCT GGACCCAGAT CGAACGCCTG
ATGGAATTCC CGCAGCACAC CACCGCCCTG GGGATACCGT ACATCATCCC GTACCTGGTC
CTGCCCCTGG GCTTTGGTCT CATGGCGCTG CGCCTTCTGC AGAATCTCAG AGGCCAGACG
CAGCTCTGTG GGCCGCTTGA CACCGCCATT GCGGTTGCCT TTGTCGGCGC CATCATCGCT
CCGGCAGTGC TGGCGGAATA CATCGAACCG CTGCCGGCCC TGTTCGGATA TTTCGGAATC
CTGTGCGTGA TCGGTGTGCC CATCGCCATC TCGCTCGGAC TCTCCACCCT GGCCACGGTC
ATCTGCGCCG AGACCCTGCC CATCGAGTAC CTGGCCCAGA CGGCTTTCAC ATCCATCGAT
TCCTTTCCGA TCATGGCCAT CCCGTTCTTC ATCGCCGCAG GTACCTTCAT GGGCGCCGGA
GGCCTTTCCC AGCGCCTCCT GGCCCTGGCC GACGAGATGC TCGGCGGCCT ATACGGCGGC
ATGGCCCTGG TCACCGTGGC GACCTGCATG TTCTTCGGGG CCATCAGCGG GTCGGGTCCG
GCCACCGTGG CCGCCATCGG CGCCCTGACC ATCCCCGCCA TGGTCCAGCG CGGCTACGAC
AAGTACTTCG CCGCCGCCAT CGTCGCCTCG GCCGGCGCCA TCGGCGTGCT CATCCCGCCG
AGCAATCCCT TCGTGGTCTA CGGCATCTCC GCCCAGGTCT CCATCGGCGA CCTGTTCATC
GCCGGCATCG TGCCGGGAAT TCTGGTCGGT CTGGTGCTCA TGACCTACGC CTACCTGTAT
GCCAAAGCGC GCAACTGGCG CGGCGAAGCG CGCAAGAGAA CCGTCGCATC CCTCATGGCC
GCGGTCTGGG AAGCCAAGTG GGCCCTCATG GTCCCGGTCA TCGTCCTGGG CGGCATCTAC
GGCGGCATCA TGACCCCGAC CGAAGCCGCC GCCGTGGCCG CCTTCTACGG CCTCATCGTC
GGCGTGTTCG TGTACAGGGA GATCGACGCC CGCAAGTTCG CCGCGTGCTG CGTGGAGTCC
TGCGAAACTT CGGCGACCAT CATCGTGCTC ATGGCCATGG CCACCCTGTT CGGCAACATC
ATGACCCTCG AAGACGTGCC CGGCACTATC GCCAGGGCCA TCCTCGGCTT CACCGAGAGC
AAGATCGTCA TCCTGCTGCT CATCAACGTG CTGCTGCTCA TCGTCGGCAC CTTCATGGAG
GCGCTGGCCG CCATCGTCAT CCTGACCCCG ATCCTCTTGC CCGTGGTTGT CGGGGTCGGC
GTCTCGCCCC TGCACTTCGG CGTCATCATC GTCACCAACT TGGCCATCGG CTTCATCACT
CCGCCCGTGG GCGTGAACCT CTTCGTGGCC AGCAGCATCT CCAAAACCAA GATCGAATAC
CTGGCTCGCA CCGTGTTGCC CATGCTCGGC CTCATGATCC TGGTGCTGCT GATTGTGACC
TACATCCCCG AAGTGCCGCT CTTCTTTATA GGCAACAAGT AA
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| Protein sequence | MEPNTNCGVL PLEAMDSPSA FKNIWGWLNE NFEKVFLVSG LLTIIFLITF QTLYRYIIVH
FVSSAGAAVW TEELARYIFI WISYLALSVA IKKRSSIRID IIYDRIPVRW QNASWVVVDI
FFLILTLTIC WYGWTQIERL MEFPQHTTAL GIPYIIPYLV LPLGFGLMAL RLLQNLRGQT
QLCGPLDTAI AVAFVGAIIA PAVLAEYIEP LPALFGYFGI LCVIGVPIAI SLGLSTLATV
ICAETLPIEY LAQTAFTSID SFPIMAIPFF IAAGTFMGAG GLSQRLLALA DEMLGGLYGG
MALVTVATCM FFGAISGSGP ATVAAIGALT IPAMVQRGYD KYFAAAIVAS AGAIGVLIPP
SNPFVVYGIS AQVSIGDLFI AGIVPGILVG LVLMTYAYLY AKARNWRGEA RKRTVASLMA
AVWEAKWALM VPVIVLGGIY GGIMTPTEAA AVAAFYGLIV GVFVYREIDA RKFAACCVES
CETSATIIVL MAMATLFGNI MTLEDVPGTI ARAILGFTES KIVILLLINV LLLIVGTFME
ALAAIVILTP ILLPVVVGVG VSPLHFGVII VTNLAIGFIT PPVGVNLFVA SSISKTKIEY
LARTVLPMLG LMILVLLIVT YIPEVPLFFI GNK
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