Gene Dbac_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1582 
Symbol 
ID8377253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1793763 
End bp1796129 
Gene Length2367 bp 
Protein Length788 aa 
Translation table11 
GC content58% 
IMG OID645000811 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_003158091 
Protein GI256829363 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTGA AATTCCGGGC CAATCTGACC GGATTCATTC TGGTGGCCAG CATCACTCTG 
GGTATTTCAG GCCTGGCGAC GTTGACCATC GATCATCTGA CCGAAACCCT CAATTTTCGC
CTGCTGGACA AGGAACTCGA CGAGTACCGC GAGAAGATTT TCGAATCCCG GAAGGTGCTC
GACGGCGTCG GCTTGCTCGG AATCCGGGAC TACGAGGACA AGGCCAAAGC CGACCTGCTC
GCCTCCTTCA AGGCGCGGGC GCCAAAGATG TTCGGCCAAC TCGGCATTGT CTCGTCCCGG
GGCGAGGCCG TCATGTACGT AGGCCTTCCC GGCGAGCAGA ATTTTGAGCT GTCGTGCCTG
CCGGAGCTGC TGCGGATCGG AGCGGGCCGG ATTGATTGCG TCACCGGCCA GGAAACGCGG
ATTGGTCCGT ACCTGTTCAT CCCGGAGTGG GATTGGCTAC TGATGGTGAC CGTCAGCGCT
GAGGAGATGC GTTTTACCCG CAACGAATTT CTGGCCAGAG TTGCGTTTAT TTTTGCCATC
GCCTCCGTTT TTGGCTGGTG GTTTTACGTT CGCGCCGCCC GGGCGGTGCT CGACCCTGTG
CTGGACCTGT CCAGAGCCGC GACGGAGATC AGTCGGGGAG ATTGGCAAGG CCTGCCTGAG
CCGCTGGCGC GCAAGGACGA GATCGGCGAA TTGAGCCGCA ATTTCGTGGC CATGGCCCGG
CGTCTGCGCG ACAGTCAGGC CGATCTGACG CGCCAGGCCG CGTCATTGCG GGAATCCAAC
ATCCATCTGG AAGCACAGAT CACGGAGCGC GTCCGTGTCG AGCATGATTT GCGCAAGGCC
ACGACTTCTT TCATGGGAAT TTTTGATTCC TCTCCTTCCG TGCTGATTGC GGTGGATTGC
GGATGCGTGG TGGCGCACTG GAATCGCACG GCCCGAACTT GGGTCGGACT TGAGCCGGAA
CAGGTTATCG GACTGCCTCT GGAACAGGCC CTTCCGCAGC TTGCTTGGCT GGTCGATACG
GTGCGGCGAT CCATGGATGA GGCGACGACG CTCAGCCTGA CCAGGCAGTC CTATGAGCAG
GCCGAAGAGA GACGGACCGT GGATATTCTG GTCAGCCCTT TGATCAGCGA CGAGGTTTAT
GGCGCGGTCA TTCGTCTGGA TGACGTGACC GCCCAGATAC GCATGGAAGA AGGGTTGATC
GCGGCCAAGA AGAGCGCGGA AAGCGCCAAT GAGGCCAAAA GCGAATTTCT GGCCAACATG
AGCCACGAGC TGCGTACCCC GTTCAGCGGC ATCATGGGCA TGATGCGGCT TTTGCAAGGC
ACGGGGCTTG ATGACGAGCA GCGCCGCTAC GTCTGCCTGG CCATCAAGGC GTCGGACAGG
TTCACCCGCC TGCTTACGGA TCTGCTCGAT ATTTCGCGCA TCGAGGCAGG CAAGCTCGAT
ATCCATGAGC AGGAGTTTTC AACATCGGAT CTGCACGACT CGGTCATGGA GATTTTTGCC
CTGGCCAGTC AGGAGAAAGG GATTTCCTTG GAGTTCTTCA TCGATCCGTC CGTACCCGCC
CGGCTGGTGG GGGACGAGAT GCGTGTGCGC CAGATCCTTT TCAACCTTGT CGGCAACGCG
ATCAAGTTCA CGGAAAAGGG ATGCGTTTGC GTCGAGATAA TCCTCCTCTC CCCGGTCAAG
GGCGCCGATC TTAGAGTCCT CTTTACTGTT TCGGACACCG GGATAGGCAT ACCTGTGGAC
ATGTTGAGCG GGATATTCGG ATCCTTCGTG CAGGTCGACG GCGCATCCTC ACGTGCCTTT
CAGGGAGCGG GACTCGGCTT GGCCATCGTC AAGCGCCTGG TGAAGCTCAT GGGCGGGCAG
ATTTTCGCGG ACAGCATCGA AGGCGAGGGG ACGAACATGC ACGTGGAACT GCCTTTCAAG
ATGGCGGGTT CACGCGCAGG CGAATCCAAA TCCCGTCTGG ACACCGGTTC AACAGTTCCC
AGGCTGCATA TCCTGCTTGT GGAAGATGAG CCGATAATCA CTTTGTACAC GCGGAAGCTG
CTGGAGAAGG CTGGTCACCA GGTGACAACG GCGGAAAACG GTCTTGAGAT ATTCGGTCTG
CCGGATCGCG ACACCATCGA CTGCATTTTC ATGGACATTC AGATGCCTGT CATGGACGGA
ATAGAGGCGA CACATGCAAT TCGCTCGTCA TCCAGGCCGG GGTACGCCAA AGATATACCG
ATCATTGCAT TGACCGCCCA TGCAATGATC GGTGACAGGG AAAAATTCCT GGGCTTGGGA
ATGGATGGGT ATTTGACCAA GCCGGTGGAC GCCAACGATC TGCAACGGGA ACTGGAGAGG
ATCGCGGCGC ATCGATCCAC TGCTTGA
 
Protein sequence
MDLKFRANLT GFILVASITL GISGLATLTI DHLTETLNFR LLDKELDEYR EKIFESRKVL 
DGVGLLGIRD YEDKAKADLL ASFKARAPKM FGQLGIVSSR GEAVMYVGLP GEQNFELSCL
PELLRIGAGR IDCVTGQETR IGPYLFIPEW DWLLMVTVSA EEMRFTRNEF LARVAFIFAI
ASVFGWWFYV RAARAVLDPV LDLSRAATEI SRGDWQGLPE PLARKDEIGE LSRNFVAMAR
RLRDSQADLT RQAASLRESN IHLEAQITER VRVEHDLRKA TTSFMGIFDS SPSVLIAVDC
GCVVAHWNRT ARTWVGLEPE QVIGLPLEQA LPQLAWLVDT VRRSMDEATT LSLTRQSYEQ
AEERRTVDIL VSPLISDEVY GAVIRLDDVT AQIRMEEGLI AAKKSAESAN EAKSEFLANM
SHELRTPFSG IMGMMRLLQG TGLDDEQRRY VCLAIKASDR FTRLLTDLLD ISRIEAGKLD
IHEQEFSTSD LHDSVMEIFA LASQEKGISL EFFIDPSVPA RLVGDEMRVR QILFNLVGNA
IKFTEKGCVC VEIILLSPVK GADLRVLFTV SDTGIGIPVD MLSGIFGSFV QVDGASSRAF
QGAGLGLAIV KRLVKLMGGQ IFADSIEGEG TNMHVELPFK MAGSRAGESK SRLDTGSTVP
RLHILLVEDE PIITLYTRKL LEKAGHQVTT AENGLEIFGL PDRDTIDCIF MDIQMPVMDG
IEATHAIRSS SRPGYAKDIP IIALTAHAMI GDREKFLGLG MDGYLTKPVD ANDLQRELER
IAAHRSTA