| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1570 |
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| Symbol | |
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| ID | 8377241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 1779411 |
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| End bp | 1782455 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645000799 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_003158079 |
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| Protein GI | 256829351 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACGT TTTCACGACG AGGGTTCATG AAACTGACCG GGGCGGGCGT TGCGGCCGTG
TCCCTGTCCC AACTGGGGTT CGATCTGAAG CCCGCCTATG CCTATGCCAA GGCCCTGAAG
ATCGAGGGAG CCAAGGAGGT CATTTCGACC TGCGCTTTCT GCTCCTGCGG CTGCCAGATC
ATCATGCACA TCAAGGACGG CAAGATCATC AGTTCCGAGG GCGACCCGGA TTATCCGGTC
AGCGAAGGTT CGCTGTGTCC CAAGGGTGCT GCGTTCTATC AGATGCACGT TAGTGATCAC
CGCGTGCTCG TGCCCAAATA CCGAGCACCG GGCAGCGACA AATGGGAAGA GAAGGATTGG
GACTGGATGC TCGACAAGAT CGCGCGCAAG ATCAAGGACA CGCGCGACAA GGACTTCCAG
CTGACCAACG ACAAGGGTGT GACCGTCAAC CGTTGGGAAT CCTATTTCCA GCTGGGGACA
TCCCAGATGG ACAATGAAGA ATGTTCCGTC ACGCATCAGA TGTGTCGGGC GCTGGGAGGC
GTGTACATCG ACCATCAGGC CCGGGTCTGA CACAGCCCAA CTGTACCGGC TCTGGCAGAG
TCGTTCGGAC GTGGCGCGAT GACCCAGCAT TGGATTGATA TCAAGAACGC CAATGCTATT
CTGATAATGG GCAGCAATGC TGCCGAGCAC CATCCCATTT CCTTCAAATG GGTTTTGAAG
GCCAAGGACG CGGGGGCCAA GGTGATCCAT GTGGATCCGA AATTCTCGCG CACGTCGGCC
AGGAGCGATC TGCATGTTCC GCTCCGTTCC GGCACGGATA TCGCTTTCCT GGGCGGCATG
GTGAAGTACA TTCTGGAGAA GGATCTGATC CAGAAGGAAT ACGTCACCGA ATACACCAAC
GCCTCCTTCA TCGTCGGCGA CGACTACACG TTCGAGGACG GCCTCTTCTC GGGTTACGAT
CCGGAAAAGA AGAAGTACGA CCAGAAGAAG TGGGCCTTCG CCAAGGACGA GAACGGGGTT
TCCAAGCGCG ACAAGACGCT CAAAGACCCG CGCTGCGTGT ATCAGTTGCT CAAAAAACAC
TACGAGCGCT ACGATCTGGA CACCGTGTCT TCCATCACCG GTGTGTCCAA GGACAACCTG
CTCGCGGTTT ACGAAATCTA CACGGCCACC GGCAAGCCGG ACAAGGCCGG GACCATGATG
TACGCCCTGG GCTGGACCCA GCATTCCGTG GGCGTGCAGA ACATCCGTCT CGGCGCGATG
GTCCAGCTCC TTCTGGGCAA CATCGGCGTG GCCGGCGGCG GCGTCAACGC CCTGCGCGGC
GAGCCCAACG TCCAGGGCTC CACGGACCAT GCCCTGCTCT GGCACATCAT CCCCGGTTAC
AACGCCGTGG CCACTTCGGC CTGGCCGACC CTGGAAGAGT ACCTCAAGGC CAACACTCCC
GTGACCAAGG ATCCCAAGAG CGTGAACTGG TGGGGCAACC GGCCCAAGTA CATGGTCAGC
CTGCTCAAAG GCTGGTTTGG CGACAAGGCC ACGGCCGAGA ACGAGTTCTG CTACAATCTG
CTGCCCAAGG TCGAGCCGGG CGTTGATTAC GCCAGCATGT TCATGTTCGA CAAAATGTAC
GAGGGCAAGG TCAAGGGCGG CATGATCTTT GGCCACAATC CGGCCATGAG CATGCCCAAC
ACCCACAAGA TCCGCGAGGC GCTTGGAAAG CTGGACTGGC TGGTGGTGGG CGAAGCGCAC
GACACCGAAA CCTCGTCCTT TTGGCGCAAC CCTTCGCTGG ACCCCAAGAA GGTGCCCACC
GAAGTGTTCC TGCTGCCCTC CTGCCAGCGT GGCGAGAAGG ATGGCACCAC CTCCAATTCC
GGCCGCTGGT ATCAGTGGCA TTACAAGGGC TACGAGCCGG CGGGCAAGAG CAAGTCCATG
GGCTGGATGG TCGTCGAGAT CATGAAGCGC GTGCGCGCCC TGTACGAAAA GGAGAAGGGC
GTCTTCCCCG AGGGCGTTCT GACCCACTCC TGGCCCAAGG AATACGATGC CGAAGACATG
GCCAAACGCA TCAACGGCCA GTTCACCCGC GACGTGACCA TCAAGGACGT GACCTACAAG
AAGGGTGATC AGGTGCCCGG TTTCGCGTTG CTGCAGGCGG ATGGCTCCAC CTCCAGCCTG
AACTGGCTCT ATTGCGGCGG CTATCCGGCG GCGGACAAGA ACCTGTCCAA GCGCCGCGAT
CTGACCCAGA CGCCCATGCA GGCCAAGCTC GGCCTCTTCC CCGGATACTC GTGGGCCTGG
CCCATGAACC GGCGCATCAT CTACAACCGC GCCTCGGTGG ACGTTAACGG CAAGCCCTTC
AATCCGGAGC TGCCTGTCAT CGCCTGGGAA GACGGCAAGT GGATCGGCGA CATTCCGGAT
GGTCCGGCTC CGCCCATGGC CATGGAAAAG GGAACCTATC CCTTCATCAT GCACACAGAA
GGCCACGGTC AGCTCTACGG CCCCGGCCGA GTGGACGGGC CGTTCCCGGA ACACTACGAG
CCGGCCGAAA CGCCCATTGC CAAGAATCCG TTCTCTGCGC AGATGAACAA CCCATGCATG
AAGGTGACGA AAAGCGACAA GGACCTGCTG GCCAAGAATG CCGATCCGAA ATACCCCATC
GTGCTGACCA CCTACAGCAT GACCGAGCAC TGGTGCGGCG GCGGCGACAC CCGCAACACC
CCGTACCTGC TTGAGGCCGA ACCGCAGCTC TATGTGGAGA TGAGCCACGA GCTGGCGGGT
GAGAAGGGCA TCAAGAACGG CGACCATGTG GTGGTCGAGA GCATCCGCGG CAAGGTCGAG
GCCGTGGCCA TGGTCACGGT GCGCATCACC CCGTTCTTGG TGGAAGGCAA GACCGTGCAC
CTTGTCGGTA TGCCTTTCTG TTTTGGCTGG ACAACGCCCG GCGTGGGCGA CGCCACGAAC
CGTTTGACCC CGTCTGTTGG TGATCCGAAC ACCACCATTC CGGAGTACAA GGCGTGTCTG
GTGAATATCC GCAAGGCCGA CAAGGTCACG GAACTGGCCA TTTAA
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| Protein sequence | MTTFSRRGFM KLTGAGVAAV SLSQLGFDLK PAYAYAKALK IEGAKEVIST CAFCSCGCQI
IMHIKDGKII SSEGDPDYPV SEGSLCPKGA AFYQMHVSDH RVLVPKYRAP GSDKWEEKDW
DWMLDKIARK IKDTRDKDFQ LTNDKGVTVN RWESYFQLGT SQMDNEECSV THQMCRALGG
VYIDHQARVU HSPTVPALAE SFGRGAMTQH WIDIKNANAI LIMGSNAAEH HPISFKWVLK
AKDAGAKVIH VDPKFSRTSA RSDLHVPLRS GTDIAFLGGM VKYILEKDLI QKEYVTEYTN
ASFIVGDDYT FEDGLFSGYD PEKKKYDQKK WAFAKDENGV SKRDKTLKDP RCVYQLLKKH
YERYDLDTVS SITGVSKDNL LAVYEIYTAT GKPDKAGTMM YALGWTQHSV GVQNIRLGAM
VQLLLGNIGV AGGGVNALRG EPNVQGSTDH ALLWHIIPGY NAVATSAWPT LEEYLKANTP
VTKDPKSVNW WGNRPKYMVS LLKGWFGDKA TAENEFCYNL LPKVEPGVDY ASMFMFDKMY
EGKVKGGMIF GHNPAMSMPN THKIREALGK LDWLVVGEAH DTETSSFWRN PSLDPKKVPT
EVFLLPSCQR GEKDGTTSNS GRWYQWHYKG YEPAGKSKSM GWMVVEIMKR VRALYEKEKG
VFPEGVLTHS WPKEYDAEDM AKRINGQFTR DVTIKDVTYK KGDQVPGFAL LQADGSTSSL
NWLYCGGYPA ADKNLSKRRD LTQTPMQAKL GLFPGYSWAW PMNRRIIYNR ASVDVNGKPF
NPELPVIAWE DGKWIGDIPD GPAPPMAMEK GTYPFIMHTE GHGQLYGPGR VDGPFPEHYE
PAETPIAKNP FSAQMNNPCM KVTKSDKDLL AKNADPKYPI VLTTYSMTEH WCGGGDTRNT
PYLLEAEPQL YVEMSHELAG EKGIKNGDHV VVESIRGKVE AVAMVTVRIT PFLVEGKTVH
LVGMPFCFGW TTPGVGDATN RLTPSVGDPN TTIPEYKACL VNIRKADKVT ELAI
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