| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1535 |
|---|
| Symbol | |
|---|
| ID | 8377204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 1739639 |
|---|
| End bp | 1740607 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645000762 |
|---|
| Product | Tetratricopeptide domain protein |
|---|
| Protein accession | YP_003158044 |
|---|
| Protein GI | 256829316 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.148756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAT TCCTGCCGAC ATGCCTTACC CTGCTGCTCC TGGCCATGGC CGGATGCGCC
GACGTCAAGT CCACCTTCGT GGGACAATAC TATCTGAACG CGGCCGAATA CGCGCAAGGT
CGCTCCGCGT TCACCTCCAA ATTGAGCGAA AACCCCGACG ATCCGATACT GAACTACTAC
ATGGCGCGTT TCGAACTTGG AGCTGACAAC CCGGAAGCCG CTCGACCTTT CATTGAAAAG
GCCGTTCGCC TGGCTCCGGA CAATGCCGAT TACCGCTTCT GGGAAGGCGT GACCTGGTGG
GCGCTGATGG AACCCGACAA GGAAAAGGCC GCCTACGAAA AAGCCCTCGC CATCAATCCT
GAGCATCTGT CCGCCAACCT GTACCTCGGG CACAACGAGC TCGACCGGGG CAAGAATGCC
GTGGCCCTCG ACTACTATGC ACACGTCCTG CGCATGGATC CTGAAGAGCC ACAAGCCCTG
TTCAACACTG CCGTGGCCCT TGACCGGCTC GGCCGTAGCC CGGAAATGCG GCGGGCCATG
AAACAATATC TGGACCTCTA TCCTGACGGC CCGATGGCTC GCCTGGGAAC GGACATGCTC
AATCGGAACG GTGACTTTTC CTGGCGCAAC CACATGCTCG GACTGCGCAC GGTCACCCTC
AAATCCATCG AATTCGAGGC CGACAGCGCC GCTCTGACCG AAGACTCGAA AGACTCGTTG
GCAGTGCTCG GGTCCATTCT GGCCATCAAG CAGGATTTGG ATTTGCATGT GGTCGTCTAC
GCTAAAGGAA ATTCCACTCT GGCCCGTCAA CGGGCGCTTG CGATCAGGGG CTATGTCAGC
GGCATGCATC CCGAAGTCTC GCCAAAACGG CTCATACCGA GTTGGTTCGA CCAACCCGAA
ATCATAAAAA TCGACGGTCG GTCCCACGCA AAGGCCGAAT CCGTCTCCAT CTTCACCAAC
GTACAATGA
|
|---|
| Protein sequence | MKIFLPTCLT LLLLAMAGCA DVKSTFVGQY YLNAAEYAQG RSAFTSKLSE NPDDPILNYY
MARFELGADN PEAARPFIEK AVRLAPDNAD YRFWEGVTWW ALMEPDKEKA AYEKALAINP
EHLSANLYLG HNELDRGKNA VALDYYAHVL RMDPEEPQAL FNTAVALDRL GRSPEMRRAM
KQYLDLYPDG PMARLGTDML NRNGDFSWRN HMLGLRTVTL KSIEFEADSA ALTEDSKDSL
AVLGSILAIK QDLDLHVVVY AKGNSTLARQ RALAIRGYVS GMHPEVSPKR LIPSWFDQPE
IIKIDGRSHA KAESVSIFTN VQ
|
|---|
| |