Gene Dbac_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1532 
Symbol 
ID8377201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1737754 
End bp1738296 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content59% 
IMG OID645000759 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003158041 
Protein GI256829313 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0195109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAAT GGGAAAACCA AGATGACGCC TGGGCCGTAA GCCGCACCTT GCAGGGCGAT 
ACAAAAGCTT TTTCCGTGAT TGTCAGGCGT TATCAGGGAC CGATCTTCAG ACTCATGCTG
CGCTTTTCCC GAGACGAACA CGCGGCTGGC GAGCTGGCGC AGGACGCATT TGTCAGGGCT
TTTGAGCGTC TGGAATCCTA TGACTCCAAA CGCCGCTTCT TCACCTGGCT CTACACACTG
GCCCTGAACC TGGCTCGCGA TCATTCGCGG CGCTATGCGC GAACCGCGTT TGAGCATCAC
GGTCTTGAGC TGGCCGGTTC GGACGGAGGG AACGACCCGC TGGCAATTCT GGAAGGCGCA
AGGCTGCATG ATGCGCTGCG CGACCTGCCG CCAAAATACA AAGAAGCCCT GGCCCTGCGC
TATATCGAGG GCATGTCCCT GGCCGAAGTG GCAGCAACGC TCGGGCTGTC CATGAGTGGC
GTCAAGATGC GGATACACCG GGCTCTGCGC ATGCTGCGCG AGAGCTATGG AGAGAACCGA
TGA
 
Protein sequence
MEQWENQDDA WAVSRTLQGD TKAFSVIVRR YQGPIFRLML RFSRDEHAAG ELAQDAFVRA 
FERLESYDSK RRFFTWLYTL ALNLARDHSR RYARTAFEHH GLELAGSDGG NDPLAILEGA
RLHDALRDLP PKYKEALALR YIEGMSLAEV AATLGLSMSG VKMRIHRALR MLRESYGENR