Gene Dbac_1478 details

Gene Information

• Locus tag: Dbac_1478
• ID: 8377143
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 1669199
• End bp: 1671172
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 645000702
• Product: acetate/CoA ligase
• Protein accession: YP_003157988
• Protein GI: 256829260
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02188] acetate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.148557
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACCTG ACAATATCCA GAGCCTGCAG CACGAACAGC GCCTCTTCAA CCCACCCGCC 
GCCAAACGGG CCCACATCCC CGACATGGCC ACCTACGAAG AGCACTATCG CCGCGCCGAC 
CAGGACCCCG AAGGCTACTG GGCCGACCGC GCCAAGGAGC TTCTCAGCTG GAGCAAACCC 
TGGGACAAGG TCATGGACTG CGATTTCACC GTTCCGAAGA TCAACTGGTT CGTGAACGGC 
CAGCTCAACG TCAGCTACAA CTGCCTTGAC CGGCATGTGG AAAACGGCCT GGGCGACAAG 
ACGGCCATCA TCTGGCAGGG CGAACCCGAA GAAGATGTCC GGCACATTTC CTTCCGCGAA 
CTTTTGCACG ATGTCATCCG CTTCGCCAAC ATCCTCAAAA AACTCGGAGT CGGACGCGGT 
GACCGCGTGG CCCTCTACAT GCCCATGGTG CCGGAACTGG CCGTGGCCAT GCTGGCCTGC 
ACGCGCATCG GAGCCACGCA TTCCATCGTT TTCGCGGGCT TTTCGGCTTT GAGCCTCATG 
AACCGCATCC AGGACTGCGA AGCCAAGGTG CTGGTCACCG CCGACGCGGT GCTGCGCGGA 
GGCAAGAAGA TCCCCCTCAA GGGCAATGTC GACGAAGCCC TCAAAGGCTG CCCCACCGTG 
ACAGCTTGCG TGGTCCTGAA GCGGGCCGGC ATCGACATCA ACATGGTCGA GGACCGGGAC 
CTGTGGTGGC ACGACGTCAT GGCCGACCCG AACATCGCCA CGAGCTGCCC CTGCGAACCC 
ATGGACTCCG AGGACCTGCT CTTCATTCTG TACACAAGCG GCTCCACGGG CAAGCCCAAA 
GGGGTCATGC ACACCACGGG CGGTTACCTG ACCTACGCGG CCCACTCCAC GCAGCTGGTC 
TTCAACCTGC ATGACGACGA CATCCATTTC TGCACGGCGG ACATCGGCTG GATCACCGGG 
CACACCTACA TCGTGTACGG TCCTCTGGCG CTGGGCGTGA CCTCGGTCAT GTTCGAAGGC 
GTGCCGTCCT ATCCCGATCC GTCCCGGTTC TGGCAGTTGG TCGAGAAGTT CAAGATCACC 
TCCTTCTACA CCGCGCCCAC CGCCATCCGG GCGCTGATGC GAGACGGCTC GGAATGGACG 
CAGAAGAACG ATTTGTCCTC CTTGCGCGTG CTCGGCAGCG TCGGCGAACC CATCAATCCC 
GAGGCCTGGA TGTGGTATCA CAAGAACATC GGCAATTCCA AGCTGCCCGT GGTCGACACC 
TGGTGGCAGA CGGAAACGGG CGGCATCCTC ATCTCCGCTC TGCCCTTCGC CACGCCACTC 
AAACCCGGCT CCGCCACCCG TCCTCTGCCC GGCGTGCATG CCCGCATCGT CGACGCCGAA 
GGCAACCCGA CCTCTGCCAA CGAAGGCGGC CACCTGATCA TCGAGCGCCC CTGGCCGGGC 
ATGCTGCGCG GCGTGTTCGG TGATCCCGAG CGCTTCAAGC AGCAATACTT CGAGCGCTTT 
CCCGGCCGCT ACGAGGCCGG CGACGGCGCG CGCCAGGACG AGGACGGCTA TTTCTGGATC 
ATGGGCCGCC TTGACGATGT CATCAACGTG TCCGGCCATC GCCTGGGCAC GGCCGAGATC 
GAGTCCGCCC TGGTCTCGCA TCCGGCCGTG GCCGAGGCCG CCGTGGTCGG CATGCCTCAC 
GACATCAAGG GCCAGGCCAT TTATGCCTAC GTCACCCTGC GCGCCGACGC GGACGAATCC 
GACGAACTCA TAAAAGCCCT GCGCAACCAC GTCCGCAAGG AAATCGGGCC GCTGGCCTCT 
CCCGAAGTCA TCCAGTTCAC CGTGGGCCTG CCCAAGACCC GCAGCGGCAA GATCATGCGC 
CGAGTACTGC GCAAGATCAC CTCCGGTTCC ACGGCCCTGG AAGACTTCGG CGACACCTCG 
ACCCTGGCCG ATCCTTCCGT CATTCAAGAT CTGATCGCCG GTCGCCATAC CTAA 

 

Protein sequence

MTPDNIQSLQ HEQRLFNPPA AKRAHIPDMA TYEEHYRRAD QDPEGYWADR AKELLSWSKP 
WDKVMDCDFT VPKINWFVNG QLNVSYNCLD RHVENGLGDK TAIIWQGEPE EDVRHISFRE 
LLHDVIRFAN ILKKLGVGRG DRVALYMPMV PELAVAMLAC TRIGATHSIV FAGFSALSLM 
NRIQDCEAKV LVTADAVLRG GKKIPLKGNV DEALKGCPTV TACVVLKRAG IDINMVEDRD 
LWWHDVMADP NIATSCPCEP MDSEDLLFIL YTSGSTGKPK GVMHTTGGYL TYAAHSTQLV 
FNLHDDDIHF CTADIGWITG HTYIVYGPLA LGVTSVMFEG VPSYPDPSRF WQLVEKFKIT 
SFYTAPTAIR ALMRDGSEWT QKNDLSSLRV LGSVGEPINP EAWMWYHKNI GNSKLPVVDT 
WWQTETGGIL ISALPFATPL KPGSATRPLP GVHARIVDAE GNPTSANEGG HLIIERPWPG 
MLRGVFGDPE RFKQQYFERF PGRYEAGDGA RQDEDGYFWI MGRLDDVINV SGHRLGTAEI 
ESALVSHPAV AEAAVVGMPH DIKGQAIYAY VTLRADADES DELIKALRNH VRKEIGPLAS 
PEVIQFTVGL PKTRSGKIMR RVLRKITSGS TALEDFGDTS TLADPSVIQD LIAGRHT