| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1471 |
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| Symbol | |
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| ID | 8377136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1661095 |
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| End bp | 1662114 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645000695 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003157981 |
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| Protein GI | 256829253 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.435801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATTC CAGGATCAGA TCACTCCGCG CAACCCTTCG ACACAAAGGC GCTGGTTCAC
GTCTTTGAGC AGCTCTGGAA GCATTCCAGC GATCCGTTCT GGATCTGCAG GCCCGTGGAC
GAGGACTATG AATTGCTGAT GGCCAACGAT GCCGCGGTCC GTCTGGACGC CAGGCAGGTC
CCCGGGAATA CGGTGCGCTC CATTGTCGGT TACGCCCTTG CGGGTGATCA GCTCATTTCC
GGATATCACG AGTGCATGGC CCGCGGCGAA GCCGTGACCT TTGAACAGCG CCCGGTCCTG
AATGGCAGCC AGCGGCTTTT CGAGACACTG CTTGTGCCTG TGAAGGACGA AGCCGGCACG
ATCACCCACA TCTGGGGCAT GGCGCGCGAC CTGACACGCT TTCTGGTTTC CCAGAACGCG
CTGGTGCATT TGAACGAACA GCTTGAAGCC AAGATTCTCC AGCGCACCAG GGAATTGGAA
GAGGCGAACC ACAGGCTGTC CGAGCTCTCG CTGACCGACG GGCTCACGGG CATCGCCAAC
CGCCGCAGGT TCGATGCGGC CTTGGCCGAG GAATGGTCCC GGTCCGCGCG AACGGGATCG
ACACTGGCGC TCATCATGCT CGATATCGAT CACTTCAAGA AATACAACGA TCACTACGGA
CACCAGCAGG GAGACGACTG TCTTCGGCGC GTGGCGGAGG TGCTCAGGTC CAGCGCCCGC
CGTCAGGGAG ACCTTGTGTC GCGCTACGGA GGCGAGGAAT TCTGCATGAT CCTCCCGGAC
ACGGCCTTGC CGGGGGCGTT TGAAATCGCC GAGCGATTGC GGCGTGAAGT GGAAAACATG
GACATGCCGC ACGTCTTGTC GGACGTGGGC AGGGTCACGG CCAGCATGGG CGTGGCGGCG
AGCATGCCGT GCAAGGCCAT GAGCCCTGCC GAGCTGCTGC GCCGTGCCGA CGAATCCTTG
TATCAGGCCA AGTCCGAGGG CAGAAATTGC GTGCGGGGCG CTTTTTCCTG CGTTGGTTGA
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| Protein sequence | MTIPGSDHSA QPFDTKALVH VFEQLWKHSS DPFWICRPVD EDYELLMAND AAVRLDARQV
PGNTVRSIVG YALAGDQLIS GYHECMARGE AVTFEQRPVL NGSQRLFETL LVPVKDEAGT
ITHIWGMARD LTRFLVSQNA LVHLNEQLEA KILQRTRELE EANHRLSELS LTDGLTGIAN
RRRFDAALAE EWSRSARTGS TLALIMLDID HFKKYNDHYG HQQGDDCLRR VAEVLRSSAR
RQGDLVSRYG GEEFCMILPD TALPGAFEIA ERLRREVENM DMPHVLSDVG RVTASMGVAA
SMPCKAMSPA ELLRRADESL YQAKSEGRNC VRGAFSCVG
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