| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1460 |
|---|
| Symbol | |
|---|
| ID | 8377125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 1650419 |
|---|
| End bp | 1651225 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645000684 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_003157970 |
|---|
| Protein GI | 256829242 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAA AATTTTCCAA AAAAGCTGTC AAGATCGACA TCGGCGACGG CGCGGCCATC
CCGCTCAAAA AGGATTCCGG CCTCTTCAAC GCCTGGTGGC TCACTTTTTT CGGCGCCATC
GGCATCATTA CCTATCTGTG CGTGACCAGG CCCGAACCAT ACTGGCGGAT TCTGCAATTT
CTTCCCGACG GCGTCGTGGT CACCTTCCAG GTCACGATCC TGTCCATCAT GCTCTCCCTG
GTGCTCGGAC TCATAACAGG CCTTGGCCGC CTGTCCCGCA ACAAAGTCCT GAATCTGATC
GCTTCGACCT ATGTCGAAGT CATTCGCGGC ATCCCGCTTC TGGTGCAGCT TTTTTACATC
TACTACGCTC TCGGACGCCT CGAATTTTTC AAGGATCTGC CTCCCATGGC CGCGGCAGTG
ACCGCCATGG GCATCTGTTA TGGCGCCTAC ATGGGCGAAG TATTCAGGGC CGGCATCGAT
TCCATCGACA AAGGCCAGGC CGAGGCGGCC AGATCCCTTG GGTTCAGCCG CGCCCAGACC
ATGATGTACG TGATCCTGCC CCAGGCCTGG CGGACCATCC TGCCACCGGT GGGCAACGAA
TTCATCGCCC TCCTGAAAGA CAGTTCCCTG GTCTCCATCC TGGCCGTGTC GGACCTCTTG
CGCCGAGGCC GGGAATTCGC CAGCGAATCC TTCATGTATT TCGAGGCATA CACCATGGTG
GCCCTGGTTT ATCTGGTCAT CACGCTCTTC TTGTCCAAGG CCGTCAGTAA AATGGAGCAG
AGGTTGAATT ATTATGAACG GGACTAG
|
|---|
| Protein sequence | MNPKFSKKAV KIDIGDGAAI PLKKDSGLFN AWWLTFFGAI GIITYLCVTR PEPYWRILQF
LPDGVVVTFQ VTILSIMLSL VLGLITGLGR LSRNKVLNLI ASTYVEVIRG IPLLVQLFYI
YYALGRLEFF KDLPPMAAAV TAMGICYGAY MGEVFRAGID SIDKGQAEAA RSLGFSRAQT
MMYVILPQAW RTILPPVGNE FIALLKDSSL VSILAVSDLL RRGREFASES FMYFEAYTMV
ALVYLVITLF LSKAVSKMEQ RLNYYERD
|
|---|
| |