| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1431 |
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| Symbol | |
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| ID | 8377096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1616217 |
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| End bp | 1618637 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645000655 |
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| Product | sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family |
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| Protein accession | YP_003157941 |
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| Protein GI | 256829213 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.333003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAA GCAACGGCCA AAACCAGTCT CTATCCAGGC TCCGCAAGCA AGCGGAAAAG
AAGTTTAAAA TGAAGTCTGC TGAATTGTAT TCGCCCCACA CCGAGGCGGA TGCGAGACGA
ATGGTGCAGG AACTCGCGGT TCAGCTGATA GAACTTGAGA TGCGGAATAA AGAATCGAGT
CGAGGCAAAG ATGAGCTGAC TCGGTCGCTG GAGAAATACA CAGATCTCTA CGCTTTTGCA
CCCATCGGCT ATTTTACCCT CAACCGCGGG GGAGAGATTC GCACCGTGAA TCTCGCTGGC
GCCGTTCTCT TGGGGCTTGA ACAGAGTGTC TTGCTCGGTC TGGACTTTAA ACTCTTTGTC
TTGAATGAAG CCTCCCGTGT TTTTTCTGAT TTTCTCGACC GGGTGTTTGC AAGCCAGGTT
AAAGAATCCT GCGAGTTCAC CCTCAAGAGC AAGCATGCCC CGGCACTTTT CGTGCGGGCG
GATGCGGTTG CGCGTGATTC CACCGAGTGT TTCGTCACGA TCATCGACGT CACTGCGCAC
AAACAAACGG AGAGGGCACT GCGCGAAAGT GAGAGGCTGT ATCGCGCCAT CGGCGAGTCC
ATTGAATACG GCGTCTGGGT TTGCGCCCCT GATGGACGAA ACATTTACGC CAGTGAGTCT
CTGCTCAACC TGCTCGGCAT AACCCAGGAG CAATGCTCCA ACTTCGGCTG GGGCGATGCA
CTGTACCCCG ATGATGCCGA ACGCACCATC GCCGCCTGGA AAGAGTGCGT AAAAAGCGAA
GGCATTTGGG ATATTGAGCA TCGTTATCGC GGTGCGGATG GGCAATGGTA CCCCATTCTG
GCGCGAGGGG TGCCGGTCAG AAATGAAAAC GGCGAGATTG TCTGTTGGGC CGGCATCAAT
CTGGATATCA GCCGCTTGAA ACAGGCTGAA GCTGCGCTGC GCGCAAGCGA AGAACTGAAT
CGCAAAACGT TGCAGGCATT GCCTGCGCAT ATTGCAGTGA TTGACCGTCA AGGCGGCATT
ATCGCCGTGA ATCATGCCTG GGAAGAGTTT GCCCGTCACA ATGATGCGGA CGGATCACCC
TCGGTTACTG TGGGTGCCAA CTACTGTGAA GTTTGCCGTC GAGCCACCGC CGGCAAGGAT
TCCTTGGCGG AGGTGGCCCT GCGCGGTATT GAGGCCGTGT TGAATGGCAC AAGTGAGCAG
TTCATGATGG AATATCCCTG CCACAGTCCG CAGGAGGAGC GATGGTTTTT CATGACCGTC
GCGCCTTTGG GTCTCGGCGG GGAGAACGGT GCGGTCATCA CGCACCTCAA TATCTCCGAG
CGGGTACGGT TCGAAGTCGA ACTTCAAAAG GCTCACGACG AACTGGAGCT CCGGGTCGAA
AAACGGACGT ACGAGCTCCG GGCTGCGAAT AAGGAGATAA ATCAGCTCAA AGACCGGCTT
CAGGCTGAGA ACATCTGCCT ACGGCAGGAG GTTGCGAGAG AGTACAACTT CGGAGAGATC
ATCGGTCAAA GCGACTCCAT CGTGAACATG TTCGAGCAAA TTGAACAGGT GTCGCCACTG
AATGCGACAG TTCTTCTGCT GGGCGAGACC GGCACCGGCA AAGGCTTGGT CGCACGGGCC
ATCCATGCCC GCAGTGCCCG CAAGGGCCGG TCCATGATCA CGGTCAACTG CGCGGCGCTG
CCGGCCAATC TCATCGAGAG CGAACTTTTT GGGCGGGAAC GGGGCGCGTT CACCGGGTCC
AACGCACAGC AGTTGGGGCG CTTCGAACTG GCCGACGGAG GCACCATCTT TCTCGATGAA
ATCGGGGAGA TGCCGCTTGA GCTGCAAAGC AAGCTGCTGC GAGTCATTCA GGATGGAGAG
ATGGAGCGGC TGGGCAGTCC CCGCACAATC AAGGTTGATG TCCGCATCAT AGCGGCCAGC
AATAGGAATC TGCAGGATGA GATCCGCAAG GGCAGGTTCC GGGAAGACCT TTTCTATCGA
CTCAATGTTT TTCCTATCTC GATTCCTCCG CTTCGTCAGC GCGACGGCGA CATCGCGTTG
CTCATCAATT TTTTTGTGGC CAAATTCAAC AAGAAGACCG GCAAGAATAT CAAAACCGTG
CCCAAAAATA CCCTGAACGC GCTGCAGGAA TATCATTGGC CCGGAAATGT GCGGGAACTG
GAAAGCGTCG TTGAGCGGGC GGTGATCACC AGTCCCGGAA GCTCCCTGCA AATATTGGAC
AGGTTTGAAA CATCGAGAAA GACGGTGCCG GTTGATGGAA ACATCAAAGC CCTGGTCGAT
CTGGAACGCG ACCACATCCT GCAGGTGCTC CGGAAGACCG GCTGGCGCAT TGAAGGCAAA
AGCGGGGCCG CGGCGCTCCT TGAAATCAAC CCCAGCACCC TGCGCGCCCG CATGCGCAAA
TTCGGCATCC GGCGCCAGTA G
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| Protein sequence | MKLSNGQNQS LSRLRKQAEK KFKMKSAELY SPHTEADARR MVQELAVQLI ELEMRNKESS
RGKDELTRSL EKYTDLYAFA PIGYFTLNRG GEIRTVNLAG AVLLGLEQSV LLGLDFKLFV
LNEASRVFSD FLDRVFASQV KESCEFTLKS KHAPALFVRA DAVARDSTEC FVTIIDVTAH
KQTERALRES ERLYRAIGES IEYGVWVCAP DGRNIYASES LLNLLGITQE QCSNFGWGDA
LYPDDAERTI AAWKECVKSE GIWDIEHRYR GADGQWYPIL ARGVPVRNEN GEIVCWAGIN
LDISRLKQAE AALRASEELN RKTLQALPAH IAVIDRQGGI IAVNHAWEEF ARHNDADGSP
SVTVGANYCE VCRRATAGKD SLAEVALRGI EAVLNGTSEQ FMMEYPCHSP QEERWFFMTV
APLGLGGENG AVITHLNISE RVRFEVELQK AHDELELRVE KRTYELRAAN KEINQLKDRL
QAENICLRQE VAREYNFGEI IGQSDSIVNM FEQIEQVSPL NATVLLLGET GTGKGLVARA
IHARSARKGR SMITVNCAAL PANLIESELF GRERGAFTGS NAQQLGRFEL ADGGTIFLDE
IGEMPLELQS KLLRVIQDGE MERLGSPRTI KVDVRIIAAS NRNLQDEIRK GRFREDLFYR
LNVFPISIPP LRQRDGDIAL LINFFVAKFN KKTGKNIKTV PKNTLNALQE YHWPGNVREL
ESVVERAVIT SPGSSLQILD RFETSRKTVP VDGNIKALVD LERDHILQVL RKTGWRIEGK
SGAAALLEIN PSTLRARMRK FGIRRQ
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