| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1426 |
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| Symbol | |
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| ID | 8377091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1609123 |
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| End bp | 1612362 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645000650 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003157936 |
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| Protein GI | 256829208 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.688315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAA CCATGCCCCT GAAAAATAAC GGTGACCTGC GTTTTGAAGA TTTCTTCGAT
CTGCGGGAGG TCCAGATTAT TCAGGACAGT TTTGCCATGG CTACGGGCGT CGCATCTCTG
ATCACTTCTC CCGAAGGGCT TCCATTAACC AGGCCAAGCA ATTTTACCCG GCTCTGCAGT
CAGGTCATCC GCGGATCCAG AGCGGGAAAC GAGAACTGCA TGCGCTCCGA CGCCCTGCTT
GGTGCGTACA ACCCAAGCGG CCCGAACGTA AGCCGCTGCA TGAGCGGCGG GTTGTGGGAT
GCAGGCGTGA GCATCACCGT GGGCGGCAGG CATGTCGCCA ACTGGCTCAT CGGGCAGGTG
CGCTCCAGCC TCGCAGACGA GGAGGCCATG CTCGGCTATG CGAAAACCAT CGGCGCCGAC
CCGCAGGAAT ACCGCGAGGC CATGAAAGAG GTGCCTTTCA TGGAAGAGGC GCAGTTCCGC
CGCGTGGCTG ATGCCCTTTT CGTCATCGCC AACTCCCTGT CCGAAAAAGC CTATCAGCAA
ACCATGCTGC TGGAGGAAAA AAGGGAGCGG CAGAAAATGG ACGCCATGCG CGAGATGCTC
ATGGATCGAA GCCTCGACGC CATTGTCGTC GTCGACCAGA ACCATCGCAT CATCGAAGCC
AACAGGCGCT TTGCGGACAT GCTCGGCTAC ACTCCCGCCG AGGTGCTGGG TTTGCGCACC
TGGGACTACG AAGCGAACAT GACCGAAGGC ATGATCAAAG AGCTGTTTTC CGATTTTTCG
CAAGTCAATT CGGTTTTCGA GACCAGGCAT CGCAGAAAGG ACGGGTCGAT CTTCGATGTG
GAGGTGACTA CGGCCGGGGC CAGCATAGAC GGCCGGTCCT GCGTCCTGGC CTTCAGCCGG
GACATTACCA CGCGCAAGGA AGCCGAGCGG CAGCTGCGCC AGAGCGAAAA GCATTTCCGG
GCGCTTTTCG AACTGAGCCG GGACGGGTTC ATCCTGGCCG ACGCGGAAGG ACGCTTTCTG
GATGCCAACA AGGCATACTG CGACATGACG GGCTATTCGC TGCCGGAGCT ACGCGCCCTG
GGCGATTTCT ACGCGCTCAC ACCCGAGAAA TGGCATGACT GGCAGCGGGA CGAGATCTGG
ACGAGGCTGT TCAAATCCGG CGACACGGGA GTGTACCGGA AAGAATACAT CCACAAGGAC
GGGCACGTGT TCCCGGTGGA ACTGCGGGAT TTCGCGGTCC ATGACGACCA CGGCGTCGTC
AGGTACGCCT GGGGCATCGT GCGGGACATT TCCGAACGCG TACGGACCGA GGAGCGGATG
CGCTCCCTCA TGCAGATGGT CGAGCAGAGT CCGGCCTGTA TCGTCATGAC CGACCCGCAA
GGCAACATCG AATACGTCAA TCCCAAATTC ACGGAGCTTT CGGGATATTC CTTCGACGAA
GCCCGGGGAC AGAATCCCCG CATTCTCGGT TCGGGCTACA AATCGCGCGA AGAGTATCAG
GATCTCTGGC GCACGATCGA ATCCGGCCGG CAGTGGCGGG GCGAGTTTCG CAACCGCCAC
AAGGACGGCA GCCTGTACTG GGAATCCGCC CTCATCGCGC CCATCCTCGA CCCTGATGGG
CGGACCACCC ATTATGTAGC CATCAAGGAG GACATCACCA AACGCCGCCA CACGGAAGAG
GAGCTGCGCA AGCGCGACAT CAACTTCAAG AAGATCGTCG ACATCCTGCC GCAACTGGTC
TCGTATATTG ATAAGGATCT GCGCTACCGC TTTGTCAACG CCACGTATTC CAGTTTTTTC
TCGCCCGGGA ACCTTATCGG CAACACCGTC GCGGAGGTCA TCGGCGAAAA GGCTTTCGAG
GCCACACGGG GGCATATCGA ACAGGTTTTT CAGGGCAAGA CCGTGCATTA CGGGGCCACT
TTGACGTATC CGGAAATGGG CGAACGCTTT GTCGATGTCT ATCTCATTCC CGATTATTCG
AGTCATGGTG TCGTGGATGG CTATTACGCG ATTCTGAACG ACCTGACCCA TTTGAAGAGA
ATCGAGGATT CCCTGCGCCT GGCCAAGGAC GAGGCGGAGG CCGCGAACAA GCTCAAGTCC
GAATTTCTGG CCAACATGAG CCACGAAATC CGCACGCCAT TGAACGGCAT CCTCGGCATG
CTGCAGCTCA TGCAGGGCTC GAACCTGGAC GCGGAGCAAC AAGAATGCCT GCACACGGCC
ATCAAATCAT CGGAACGCCT GACCCGCCTC CTGAGCGACA TTCTCGACAT TTCAAAGATC
GAGGCGGACA GACTGATTTT CCGGGAGCAT GCCTTCGACA TCATGGATGT CGAAAAGGCG
CTCACGGAAT TGTTCGGCCA GGCAGTAAAG GAAGCAGGCA TCGCCTACGA CTTCAGAGTG
GACCCCGGCC TGCCGAAACA GGTCCTGGGC GACGAGGCGC GGCTGGTGCA GATACTTTTC
AATCTGGTCG GCAACTCCCT CAAATTCGCT GACAAAGGCT ACGTAAGCGT CGATATCACG
CCCCTTCCGT TCACGGCGGG CGCGCCGCTG CGACTGCTTT TTTGCGTCAC CGACTCGGGC
CTTGGCATGT CGGAGCAAAC CCAGCGCGAC ATCTTCGAAC CTTTCATCCA AAGCGACGGC
TCCTACACCA GACGCCATCA GGGAGTGGGG CTGGGGCTGA CCATCGTGCG CAAACTCGTG
CAACGCATGG GCGGTAGCCT CTGTCTGGAT TCAGTCTCCG GGCAGGGCAC GGCGGTGTAT
GTTTCCCTGC CGTTTGGGCT GCCGCCTGAT CGCAGCGGGG AAGATCCCAC ATCCTGCGGA
CACTGCGATG GAGTGCCGGG CCTGCGCCTG CTCATGGTCG AGGACGATGC GGTCAATCTG
CTTTGCGGAC AGCGCCTGCT GGAAAAATCA GGGTATGTGG TCACAACGGC CCGTGATGGC
CAGGAGGCCC TTGAAGTACT CATGGTCCAT GATTTCGATC TGGTGCTGAT GGACATTCAG
ATGCCGGTAC TGGACGGAAT CCAGACCACC CGGGCCATCC GCCATGCCGC GCCATTCGCG
CACGTATCAA CGATCCCCAT TATCGCCCTG ACCGCTCACG CCATGGCCGG GGATCAGGAA
AAATTTCTGG CTGCGGAAAT GGATGGATAC CTGAGCAAAC CTTTTGACAT TTGTAAAATC
AACCAGGAGA TCGCCAGGGT CGTGTCCCTG CCCCGCAGGG GAGCGCGCCA GGCGGATTGA
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| Protein sequence | MTKTMPLKNN GDLRFEDFFD LREVQIIQDS FAMATGVASL ITSPEGLPLT RPSNFTRLCS
QVIRGSRAGN ENCMRSDALL GAYNPSGPNV SRCMSGGLWD AGVSITVGGR HVANWLIGQV
RSSLADEEAM LGYAKTIGAD PQEYREAMKE VPFMEEAQFR RVADALFVIA NSLSEKAYQQ
TMLLEEKRER QKMDAMREML MDRSLDAIVV VDQNHRIIEA NRRFADMLGY TPAEVLGLRT
WDYEANMTEG MIKELFSDFS QVNSVFETRH RRKDGSIFDV EVTTAGASID GRSCVLAFSR
DITTRKEAER QLRQSEKHFR ALFELSRDGF ILADAEGRFL DANKAYCDMT GYSLPELRAL
GDFYALTPEK WHDWQRDEIW TRLFKSGDTG VYRKEYIHKD GHVFPVELRD FAVHDDHGVV
RYAWGIVRDI SERVRTEERM RSLMQMVEQS PACIVMTDPQ GNIEYVNPKF TELSGYSFDE
ARGQNPRILG SGYKSREEYQ DLWRTIESGR QWRGEFRNRH KDGSLYWESA LIAPILDPDG
RTTHYVAIKE DITKRRHTEE ELRKRDINFK KIVDILPQLV SYIDKDLRYR FVNATYSSFF
SPGNLIGNTV AEVIGEKAFE ATRGHIEQVF QGKTVHYGAT LTYPEMGERF VDVYLIPDYS
SHGVVDGYYA ILNDLTHLKR IEDSLRLAKD EAEAANKLKS EFLANMSHEI RTPLNGILGM
LQLMQGSNLD AEQQECLHTA IKSSERLTRL LSDILDISKI EADRLIFREH AFDIMDVEKA
LTELFGQAVK EAGIAYDFRV DPGLPKQVLG DEARLVQILF NLVGNSLKFA DKGYVSVDIT
PLPFTAGAPL RLLFCVTDSG LGMSEQTQRD IFEPFIQSDG SYTRRHQGVG LGLTIVRKLV
QRMGGSLCLD SVSGQGTAVY VSLPFGLPPD RSGEDPTSCG HCDGVPGLRL LMVEDDAVNL
LCGQRLLEKS GYVVTTARDG QEALEVLMVH DFDLVLMDIQ MPVLDGIQTT RAIRHAAPFA
HVSTIPIIAL TAHAMAGDQE KFLAAEMDGY LSKPFDICKI NQEIARVVSL PRRGARQAD
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