| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1424 |
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| Symbol | |
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| ID | 8377089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1602631 |
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| End bp | 1605783 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645000648 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003157934 |
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| Protein GI | 256829206 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.4662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGTT TACGTTTGAC CGACAGCGCA ATCCCGCAGG TGGTGCGGTG CGGTGCGCGG
CAGTTCCTCC CCCTCTTGCT GCTCTGTCTG TTTCCGCTCT CTGCCTTGGC AGAAGGGGAG
CGGGTGCTTT TTATCAGTTC CTATCATCCA GGTTTTCCGA CCTTTTTTCA ACAAACCGAG
GGGCTGCGTA CGGAATTGGA ACCGGCGGGC ATCACCCTTG ACGTCGAATT CATGGACACC
AAGCGTTTTT CCGGAACCGA GTATGAGGCG CTCTTTTTGG AACATCTGCG CTTTAAGCTG
AAAAAAGTCC CTGCCTACGA CGCTTTCGTC GTTGCCGATG ACGCTGCATT GCATTTCGCC
TTGGATAACC GTCAGGAGCT CTTCGCAGGG AGACCCGTGA TTTTTTGCGG CGTCAACAAT
CAGGACCTGG CCCACGCATT GAGCGGTACT CCAGGCATCA CCGGCGTCAT CGAATCCATT
TCAATACGTG AGACTCTTGA AGCCATGTGG CGCTTGAGGC CCGGGTTGAA AACGGTCTAC
GCGCTGGTCG ACGGGGAGCC TGGCGGTCAG GGCGACCTGC GCACCTATCT GGCGCAGCGT
GAGTTTTTTT CCGAAAAAAG CCTCCAGGTT CTGGGCCTTG ACACCATGAC CTGGAACGAA
CTTAGGGACA GACTTTCCGC TCTGCGGCAG GATGAAGCCG TCCTGCTGCT TTCCGCATAT
CGTGACCGTG ACCTTATAAC CAGGTCCTTT GAAGATGCTT TGAAATTCAT TCTGGCTCAC
ACGCGCGTGC CGGTGCTGCA TCTCTGGGAA CATGGTCTAG GCCAGGGAAT CTTCGGAGGC
AGGATCATCT CGCACACGGA GCAAGGGCGC ATCGCTGGCC AGTTGACCCT GAAAATACTG
GCGGGAACGC CTGCTCATTC AATACCTGTG GTCGAAGGCA GCGAGGCCAA CCGTTATGTT
TTTGACCATG CGGTCCTGAC CCGCTTCGGC ATCAAGGAAT TCCAGCTGCC TTCGAGCAGC
GAAGTCCGGG GCAAGCCTTT CTCCATCCTT TCCCAATACG GTACGGAAAT TTTTGTCGCG
GTCGTGTTCC TGGTTACGCT GATAGCCCTT GTAGTGACCC TGATCAGTCA CATATATCGA
TTGCGCAGGG CACAGGTTCA GATCACGGAC AGCGAGAAAC GCTACAAAGC CCTCTTCGAT
GCCAACTCCG ATGGAATTCT GGCCGCCGAC AGCGTGACTC GACGTTTTGT TTTCGCCAAC
CCCGCCGTGT GCCGAATGTT CGGCTACTCC GAAGAGGAGT TTCGCGGGTT GAAAGTAGAC
GATATCCATC CGCAGGAAAA TCTTGAAGAG GTTCTTGGCA ATTTCAACGC CCAGGCCCTC
GGGCAAACAG ACGTTGCGGA GGCGCTGCCC TGCCTGCACC GGGATGGGAG TGTTTTCACG
GCCGACATCC GCAGTTTTTT GCTCAAGATC AATGGAACGT CCTGCGCCGT GGGCCTTTTC
CGGGACGTGA CCGAGCGCAG CCAGATCCTT GATGCCTTGC GTCAGACTCA GGAGCGTCTG
GCACTGGCCA TCGCCGGCAG CAATGACGGC ATCTGGGATT GGGACCGGGT TGCCGACCAG
GTCTATTTTT CCCCGCGCTG GAAGGAGATC ATCGGCTACG AGGATCACGA ACTGCGCAAC
GACCTGGAGG AATGGCGAAG CAGGATTCAT CCCGAGGACA GGGAGCGGGT GCTGGCCGTG
AACAACCAGT TTTTCAGCAG CGATGCGTCC CACTTCGTCA TTGAATACAG GCTGCGCCAC
AAGGACGGAA CCTACCGCTG GATCATGGGG CGAGGCACCT GCCTGCGCGA CGATGAAGGC
GTGCCATGCC GCATGGCCGG TTCGCACGCG GACATCACCG AACGCAAGGC CATGGAACTC
GAACTTGTGG GCGTACGCGA CGCTGCCCTG GCTGCAAGCG TCGCCAAGAG CGCCTTTCTG
GCCAACATGA GCCACGAGAT CCGCACGCCG TTGAACGGGA TAATGGGCAT GCTGCAGTTG
CTTGACTCCT CATCCCTGAC CGAAGAGCAA AAAAACTACG TGCGCATGGC CGATGTTTCG
GGCCGGCGTC TGACAGCACT TTTGTCAGAC ATTCTGGACA TCTCCCGGAT CGAAGCTGGT
AAGTTGTTGT TGACGGAACG CGCTTTTGAC CTTGAAGAGA TGCGGACTTC CATTATAACT
CTTTTTTCAA TCCCCGCGCA GGAGAAAGGC ATAAGCCTTG TCGTTGAGCT GGCTCCTGAT
CTTCCTCCAA GGTTGATCGG GGATGATCTG CGGCTGCGGC AGATTCTTTT CAACCTGGTT
GGAAACGCAG TCAAATTTAC CAATGAAGGT TTCGTGCAAA CGCAGATAAG TTTGCTGTCC
AGCCAGGCCG ACAACGGATG CCGACTTCTG TTTTCTGTCC AAGACAGCGG TGAGGGCATC
AGCGACACGC TCTTGCCCGC CATTTTCGAG CCTTTCGTGC AGGGCGAGGG GTCCTATGTG
CGCTACCACC AGGGGGCGGG ACTTGGCCTG GCCATTGTCG GACGTCTCAT GCGCATGATG
GGCGGGTCGC TGGCCATCGA CAGTTCGGAC AGCGGCACGA CGATATGTTT TTCCCTGAAC
TTCAGGATCC CGGAAGCACC GGCAAAAACA ATCGTCGAAT GCGAACATTC TGAAAAGACA
GGGCACGGGA ATCTGCGTAT TCTGCTCGCT GAGGACGATC CGGTGAACAT GTTCGCCGCG
CGGCGCATTC TGGGCAAGGC GGGACATGCG GTCACCCCGG CCACGAACGG TGGGCAGGCT
GTCGAATTGC TGCGGGAGTC GGAGTTTGAC CTTATCCTCA TGGATGTGCA GATGCCGGTC
ATGGACGGTT TGGAAGCCAC GGCAATGATT CGTGGCGATG CAACCCTGGG TGAAAAATCC
CGCATCCCCA TCGTGGCCAT GACCGCCTAC GCCATGAGCG GCGACCGGGA GAAATTCCTG
GCCGGAAGCA TGGATGGCTA TATCGCCAAG CCTCTGAGTT GCGAGACTCT TTACGAAATC
ATTTCCAATG TCATTGCCCG AAAAAATATC GAACCGGAGC CATGTGCACG AGGTGTTTCG
AACGAAAAAG GCACCCTGGA ATCTAATCCT TAG
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| Protein sequence | MKSLRLTDSA IPQVVRCGAR QFLPLLLLCL FPLSALAEGE RVLFISSYHP GFPTFFQQTE
GLRTELEPAG ITLDVEFMDT KRFSGTEYEA LFLEHLRFKL KKVPAYDAFV VADDAALHFA
LDNRQELFAG RPVIFCGVNN QDLAHALSGT PGITGVIESI SIRETLEAMW RLRPGLKTVY
ALVDGEPGGQ GDLRTYLAQR EFFSEKSLQV LGLDTMTWNE LRDRLSALRQ DEAVLLLSAY
RDRDLITRSF EDALKFILAH TRVPVLHLWE HGLGQGIFGG RIISHTEQGR IAGQLTLKIL
AGTPAHSIPV VEGSEANRYV FDHAVLTRFG IKEFQLPSSS EVRGKPFSIL SQYGTEIFVA
VVFLVTLIAL VVTLISHIYR LRRAQVQITD SEKRYKALFD ANSDGILAAD SVTRRFVFAN
PAVCRMFGYS EEEFRGLKVD DIHPQENLEE VLGNFNAQAL GQTDVAEALP CLHRDGSVFT
ADIRSFLLKI NGTSCAVGLF RDVTERSQIL DALRQTQERL ALAIAGSNDG IWDWDRVADQ
VYFSPRWKEI IGYEDHELRN DLEEWRSRIH PEDRERVLAV NNQFFSSDAS HFVIEYRLRH
KDGTYRWIMG RGTCLRDDEG VPCRMAGSHA DITERKAMEL ELVGVRDAAL AASVAKSAFL
ANMSHEIRTP LNGIMGMLQL LDSSSLTEEQ KNYVRMADVS GRRLTALLSD ILDISRIEAG
KLLLTERAFD LEEMRTSIIT LFSIPAQEKG ISLVVELAPD LPPRLIGDDL RLRQILFNLV
GNAVKFTNEG FVQTQISLLS SQADNGCRLL FSVQDSGEGI SDTLLPAIFE PFVQGEGSYV
RYHQGAGLGL AIVGRLMRMM GGSLAIDSSD SGTTICFSLN FRIPEAPAKT IVECEHSEKT
GHGNLRILLA EDDPVNMFAA RRILGKAGHA VTPATNGGQA VELLRESEFD LILMDVQMPV
MDGLEATAMI RGDATLGEKS RIPIVAMTAY AMSGDREKFL AGSMDGYIAK PLSCETLYEI
ISNVIARKNI EPEPCARGVS NEKGTLESNP
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