Gene Dbac_1422 details

Gene Information

• Locus tag: Dbac_1422
• ID: 8377087
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: -
• Start bp: 1600146
• End bp: 1602104
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 645000647
• Product: transcriptional regulator, XRE family
• Protein accession: YP_003157933
• Protein GI: 256829205
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2202] FOG: PAS/PAC domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCAC TAGGAAGTTA TCTCACCGAG CGCAGAAAAG CACTCGCCGC CAAACATTCC 
GGATATTCAA TCCGGAGCGT GGCCAAGCGT ATCGGCATCC ATCATTCCTA CTTGAGCAAG 
CTGGAACGCG GTGAGAACGC GCCCCTGACG GAAGAGCGCA TCCACGCCCT GGCCAGGCTT 
CTGGGAGAAG ATCCGGATCT GCTCATGGCT CTGTCCGGGA AATTGTCCGA TCGTATCACC 
GGACTCATCC GTTCAAATCC CCTGCTTTTT CTCGGCAGCG TGGAAGCACT TGAAAAGCAG 
AACGCAAGCA TGCCCGATGC TCCGGCCCTG CGCAAGGATC TGCGCAAAAA CGAACTCGAA 
GAGCTGACCC GCCTGCTGCG CGACGAAATA CGGGAGCGCC AGGTTCTTGA GTCGCAACTG 
CGCGAGCAGC AGCGGGTGCA GCGCACCATT CTGGAAAATC TGCAGGACGT GTCGGTGACG 
CTGCTGGATT CCCAGTTTCG CATTCTGTGG TCAAATTCCC CGGTTACCGA AAGCCCTGCG 
AATTTTCTGG ATCACCACGA TTTGAAGAAG AGTGAGCCGG CAAGCCAAAA CGGTTCAAGC 
GAATCCGAAT CGGGAGCTTT CAGCACCGCC TGGCGGGCCA TGAAGACCCG CACAGTGCAA 
AACGGAACCT ACAGGTCCCC GGACGGCAAG CATTGGCTCG TTCGCAGCGC CCCGGTGCTC 
GATACTCATG ACAACGTGAC CCAGATCGTC CACATGCAGT TCGAGGTTAC GGAGCTCATG 
CATGCCAAGC AGGCCCTGGA GGCCAGCGAG CAGCGCTGGA AATTCGCCCT GGAGGGGGCG 
CAGGAAGCAG TGTGGGATTA TGATGTCCCT TCCGGAAGAA TGCAGTGCTC GCCTTCGTGG 
TACACGATGC TTGGCTACAA GGATGGGGAC CTTGAACCGA CCATCACGCA ATGGGAAGCC 
CTGCTCCACC ACGATGACCG CGTTCCGACC TTGAACATGC TTTCAGCCCA TTTTCGCGGG 
GAAACGGATT TTTATGATTT TGAATATCGC CTGCGCTGCA GTGACGGTTC CTACAAATGG 
ATCCACTCAC GGGGTAAGCT CATGGAGAAA AGCGGCATTG GGACACCGAT ACGCATTATC 
GGCACGAACT ACGACATGAG CGAGCGCAAG GCGGCCGAAG AACAGATCCT CGCCAACGAG 
GCTTTCCTTG AAAATCTGCT CGGCAGCATC GAGGAAGGAA TCAGCGTGCT CGCACCGGAC 
ATGACGGTTC GCTACGCCAA CCAGACCATG ACCCGCTGGT ATGCCGAAGA GATGCCCGTC 
GTGGGACGCA AATGCCATCA GGCCTTTCAT CGTCTGGGCG AGTGCTGTTC CCGCTGTCCG 
GCGGTCAGAA CCCTGCGCAC GGGTCGCAAT GAATTCGAAA TACTCGAAAT CATGTCCTCA 
ACGGCCTCTC GCGCCATCGA ATTCAACGCA TATCCGATCA AGGATGCGCA AAGCGGACTG 
GTCACCGGCG TCATTGTCTT CGTGCGCGAC ATCACCTCCA AAAGACAGAT TCAGCAGGCC 
CTGGCCGAAA TCGAGAACAA GTATCACACC ATCTACGAAG GCGCGCCCAT CGGCATGTGC 
ACGGTGGACG CCCGTGGCCG GTTCGTGTCC ATGAACCCCA GCTACGCCCG CCTCTACGGC 
TACGCGTCAT CCGGCAAGAT GATGAATTCC GTGCGCGACG TATCCGAGCT TTTTGATTCT 
GCTGAAGATT GGCAGCGGCT GCGGAAGATG CTCCAAGCGC AGGACGAAAT TTTCGGATTT 
GAGTGCCGCA TTCGCCGCGC CGACGGGAGC ACAATCTGGA CTTCCCGCAC CATCCGCGTG 
GTTCGCGACG CCCGGGGCGA GCTTTTACAG TATGATGTTT TTGTAGAGGA TATCGAAGCC 
AGAAAGACTC TCGAACTGCT TACGAGCGGT TCGCAATGA 

 

Protein sequence

MSALGSYLTE RRKALAAKHS GYSIRSVAKR IGIHHSYLSK LERGENAPLT EERIHALARL 
LGEDPDLLMA LSGKLSDRIT GLIRSNPLLF LGSVEALEKQ NASMPDAPAL RKDLRKNELE 
ELTRLLRDEI RERQVLESQL REQQRVQRTI LENLQDVSVT LLDSQFRILW SNSPVTESPA 
NFLDHHDLKK SEPASQNGSS ESESGAFSTA WRAMKTRTVQ NGTYRSPDGK HWLVRSAPVL 
DTHDNVTQIV HMQFEVTELM HAKQALEASE QRWKFALEGA QEAVWDYDVP SGRMQCSPSW 
YTMLGYKDGD LEPTITQWEA LLHHDDRVPT LNMLSAHFRG ETDFYDFEYR LRCSDGSYKW 
IHSRGKLMEK SGIGTPIRII GTNYDMSERK AAEEQILANE AFLENLLGSI EEGISVLAPD 
MTVRYANQTM TRWYAEEMPV VGRKCHQAFH RLGECCSRCP AVRTLRTGRN EFEILEIMSS 
TASRAIEFNA YPIKDAQSGL VTGVIVFVRD ITSKRQIQQA LAEIENKYHT IYEGAPIGMC 
TVDARGRFVS MNPSYARLYG YASSGKMMNS VRDVSELFDS AEDWQRLRKM LQAQDEIFGF 
ECRIRRADGS TIWTSRTIRV VRDARGELLQ YDVFVEDIEA RKTLELLTSG SQ