| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1413 |
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| Symbol | |
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| ID | 8377078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 1588712 |
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| End bp | 1591468 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645000639 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003157925 |
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| Protein GI | 256829197 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTGA TCGCCAACGA AAAGTCAATC CCGCGCATTC ATCTGGTCGG CACGCTGTTA
GTCGTACTGC TGCTAACGGT CGGACTTGCC GGCTATAACT TGTGGCAAAG CCGGCAGAAT
GCGCAATCGT CCTTCGACCG CATTGAGCAG ACCCTCACCG AGCAGATCGA TGCACGCCTG
AAGGCTGAAA TGCACCGCGC CATGACCACC CTCGAATATA TCCGCAGCCA GACTGAGGCA
GTCCTGCGTG AAAGCATTGT GCAGCAGGTA GATAGCGCCT ATCAGATTGC CGAAGCCATC
CACACCCGGG AGTCTGGCCT CCGGCCGAAG GCCGAAGTCC AAAAAATGAT CGTCGAGACG
CTCCGGCCGA TACGCTTTTA CGACGGCCGC GGCTATTTTT TCATCGATGA CATGAACGGC
CAGTTCATCC TGCTGCCCAC GTCGCCAGAG CTCGAAGGCA AAACCCTGCT CGACAATCAG
GATGACACCG GCCACTTCAT TATGCAAGGC CTGATCGCCG CCGCAAGACT GCCTCGCGGC
GAGGGCTTCT CGCGCTATCG CTGGTACACG CCGGAAAATC CCACAGTGAT GGCCGACAAG
CTGTCCTACG TCCGATATTT CGAGCCTTAC GACTGGCTGA TCGGCACTGG CGACTACCTC
TACAAGTGGG CGGAAAGGCA AAAGCAGGAA GCGATGTTGC AACTGCGTGA TCACCGCTTC
AACACAACCG GCTACGTCGC GCTGTTCGAT TCCGACGGCA GTTCGCTGCT CTCGCCCTCC
AAAGCCGCGC TTGAAGGCAA GACGGCAGCC GACCTGTCTG TCTTTGAACG CAGCGTCCTC
GAAAAGCTGC TGAGCACTGC CCGAGCCGGC GGCGGCATCG TCCACTACGA TTGGCCGCAA
GCAGGCACCG GCACGCTGGC GAAAAAAACG GCCTATGTTC AGACCTATGC TCCCTGGCAG
TGGGTCGTGG TGACCACCAT ATTCGATGAC GAGGTGCATG CGGCGGTCGC AGCTGAACAA
CAAAATCACG CGCAGCTGAT TACCCGGCAG GCACTGACAA TCACGCTGGC GGGACTGATG
GCGTTGCTGA TCGGCCTGAT CGTCTCATGG ATATTCTCGC GCTGGATGCG CCAATTGTTC
ACGGAGTACC ACCGCAACAA TCTCGCCCAA CAAGAGGCCT TGCGCCAACA GGCAGATGCA
TTGCACAAAA CCCAGGGCAT CCTGGAGCAG GCTCAAAGCA TCGGCCACAT GGGCAGCTGG
CGGCTGGACC TGGTCGAAAA GCGCCTGACA TGGTCGGACG AAGCCTACCG CATCTTTGGT
GCAACGCAGG ACGAAGTTGA ACCCAGCTAC GAGCTGTTCA TGGCCATCGT GCACCCCGAC
GACCGCGCCG CCGTTGACCA TGCTTATGCC TCCTCCATTA AGGAAAATGG GGAGCGCTAC
GAAATTGAGC ATCGCATCGT ACGCAGGGAC GACGGAGAAA TCAGTTTTGT AATCGAACGC
TGCGTCCATG AGCGGGATGC CGAAGGCACG GTCATCCGCT CCGTCGGCAT GGTCCAGGAC
ATCACCGAGC GCAAGCGGGA GGAGAAAGAA CTGCTGCTGG CGAAGGAGCA TGCCGAAGCA
GCTAACCGGG CCAAGTCCGA ATTCCTGGCC AATATGAGCC ACGAGATCCG AACTCCCTTG
AACGGCATCT TGGGCATGCT TCAGCTCCTT GAGACATCTG TGCAGGATAA GGAAGAGTTG
CAGTTTTGTG CCTTGGCCAT CCAGTCCACC AATCGTCTGA CTAGCCTGCT TTCGGACATT
TTGGACCTCT CCCGGGTCGA GGCGAGCATG ATGCTCATCC GCTCCGAACG CTTCAACCTG
CACAGCGCAC TGACTCAGAC CATTGATCTT TTCGGACCTG TCGCCGTTCA GACCGGTGTC
ACGTTGACAG CGCATCTCGA CCCTGGTCTT CCGATTTGGG TTGTCGGAGA TTCCATCAGG
CTACAGCAGG TGCTCACCAA TCTGATCGGT AATTCCTTCA AATTCACCAA GCGCGGGCAC
GTGCACGTCG AGGCCTATCC GCTTCCGTCA CGCAGCATCG ATACCTTAAG AGTTTTCTTC
GCCATTGAAG ATACGGGGTG CGGTATTGCG GAAAAAGATA TTGGGAATCT GTTCCAACCT
TTCACCCAGG TAAGCCAGGG ATATAATCGG AACCACCAGG GTGCCGGATT GGGCCTAACC
ATCAGCAAGC AACTGGTGGC CCTCATGGGC GGCAACATGG CCGTGGAGAG CGAGGAGGGA
GTGGGCACGA CCTTTGCTTT TTGCGTGACC TTCAGCAAGG AAGTGCAGCC TCATGACGAC
GAGGCTGCGC CAGAGAGCCT TACTGCGCCG CCGACGTCCC TCCAAATCCT TTTGGCCGAA
GACGACGAGA CAACGGGTTT CAGTATCAGC AGGCTGTTGG AGAAGTCCGG GCACAGCGTA
ACCCTGGCCC ACAACGGGCA GGAAGCCCTG GAAATGCATG AAGCGAATAA TTTCGACCTC
ATCCTCATGG ACGTATCGAT GCCGGTCATG GATGGCATCG CAGCCTGCCG GCGCATCCGA
GGCTCTAGAA ACTCACACAA ACGGGATGTC CCCATCATCG CCCTGACGGC CTACGCCATG
GCCGGAGATA AGGAGAAATT TCTGGCTGCG GGCATGAGCG GATACGTAGC AAAGCCCGTA
ACTATGGAGA CCCTCATGCA GATGATGGTC GAAACGCTCT CAGAACAGCG GCGTTAG
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| Protein sequence | MRLIANEKSI PRIHLVGTLL VVLLLTVGLA GYNLWQSRQN AQSSFDRIEQ TLTEQIDARL
KAEMHRAMTT LEYIRSQTEA VLRESIVQQV DSAYQIAEAI HTRESGLRPK AEVQKMIVET
LRPIRFYDGR GYFFIDDMNG QFILLPTSPE LEGKTLLDNQ DDTGHFIMQG LIAAARLPRG
EGFSRYRWYT PENPTVMADK LSYVRYFEPY DWLIGTGDYL YKWAERQKQE AMLQLRDHRF
NTTGYVALFD SDGSSLLSPS KAALEGKTAA DLSVFERSVL EKLLSTARAG GGIVHYDWPQ
AGTGTLAKKT AYVQTYAPWQ WVVVTTIFDD EVHAAVAAEQ QNHAQLITRQ ALTITLAGLM
ALLIGLIVSW IFSRWMRQLF TEYHRNNLAQ QEALRQQADA LHKTQGILEQ AQSIGHMGSW
RLDLVEKRLT WSDEAYRIFG ATQDEVEPSY ELFMAIVHPD DRAAVDHAYA SSIKENGERY
EIEHRIVRRD DGEISFVIER CVHERDAEGT VIRSVGMVQD ITERKREEKE LLLAKEHAEA
ANRAKSEFLA NMSHEIRTPL NGILGMLQLL ETSVQDKEEL QFCALAIQST NRLTSLLSDI
LDLSRVEASM MLIRSERFNL HSALTQTIDL FGPVAVQTGV TLTAHLDPGL PIWVVGDSIR
LQQVLTNLIG NSFKFTKRGH VHVEAYPLPS RSIDTLRVFF AIEDTGCGIA EKDIGNLFQP
FTQVSQGYNR NHQGAGLGLT ISKQLVALMG GNMAVESEEG VGTTFAFCVT FSKEVQPHDD
EAAPESLTAP PTSLQILLAE DDETTGFSIS RLLEKSGHSV TLAHNGQEAL EMHEANNFDL
ILMDVSMPVM DGIAACRRIR GSRNSHKRDV PIIALTAYAM AGDKEKFLAA GMSGYVAKPV
TMETLMQMMV ETLSEQRR
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