| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1401 |
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| Symbol | |
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| ID | 8377066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 1570205 |
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| End bp | 1570957 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645000627 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003157913 |
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| Protein GI | 256829185 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.288863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAAA ACAGCCCCGT TCGTTTGAAC AAATATCTTG CCGATGCCGG CATAGCCTCC
CGTCGCGGAG CCGACGCCCT GATCCAGGGC GGGCGAGTCT GCGTGAACGG CCTTATCCAG
CGCGAGCCCG GGACCAGGGT CATTCCCGGC CAGGACACGG TGCTCTGCAA CGGCGCACCG
GTCTCGGCCA AGCAGAATGC ACCGTCCTCC TACATCATGC TGCACAAGCC GGTGCATACG
GTGACCACGG TCAATGATCC CCAGGGCCGC AAGACCGTCG TCGACCTGCT GCCCGAAGAA
CTCCGCACGC TGCGCCTCTT TCCCGTGGGA CGGCTCGATT ACATGTCCGA GGGCCTGCTC
CTCTTGACCA ATGACGGCGA GGTCACCCTG CGCCTGACCC ACCCCAGCTA CGAACACCCG
AAAAAATACG AGGTGCTGGT GCGCGAGGCG GTGACGGAGA AATCCCTTGG CATCATGCGC
CAGGGCATGC GCCTGCAGGA AGGTGAACGG CTGGCTCCGG TGGAAGTCGA AAGCGCCTCC
GATGCCGGCG GGGCGACGCT CTTGCGCATG ACTCTGCGCC AGGGCGTGAA CCGTCAGATC
CGGCGTATGT GCCGCGACCT GGGGCTGACC ATCCTGCGAC TGCGTCGCAT TGAATTGGGA
CCGTTGTTTT TGGGGAATCT TGAACCCGGA AAATGGCGCG CCCTGACCGA CGCCGAAATA
AAGACCCTGA AATCAAGCCT TGGTCTCGAC TGA
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| Protein sequence | MPENSPVRLN KYLADAGIAS RRGADALIQG GRVCVNGLIQ REPGTRVIPG QDTVLCNGAP
VSAKQNAPSS YIMLHKPVHT VTTVNDPQGR KTVVDLLPEE LRTLRLFPVG RLDYMSEGLL
LLTNDGEVTL RLTHPSYEHP KKYEVLVREA VTEKSLGIMR QGMRLQEGER LAPVEVESAS
DAGGATLLRM TLRQGVNRQI RRMCRDLGLT ILRLRRIELG PLFLGNLEPG KWRALTDAEI
KTLKSSLGLD
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