Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1394 |
Symbol | |
ID | 8377059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 1566134 |
End bp | 1566757 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645000620 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_003157906 |
Protein GI | 256829178 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCCTG ATACCTATCT CGCCTTTCTC TTGGCCACCA TAGTAGTCTT GGTCATTCCT GGACCGACTA TCATGTTGGT GGTGAGTTGT TCGCTGACCC AAGGCAAACG CTTAGCCCTG CCGCTAGCCC TGGGCGTCGG TCTTGGCGAC ACCGTGGCAA TGATTGCGTC CATGGCCGGG CTTGGCGCAT TGCTTGCCAC CTCGGCCACG CTGTTCACTG TGCTCAAGTG GGTAGGTGCG TTCTATCTCG TCTACTTGGG CGTAAAGACC TTTCGAACCA ACCCCGTGTC GGGCAAGGAC TTGCCGCGTG TTGCTTCTGT ATCGCGCGGG GCCAGCGTGT TCCGTGCATT TGCGGTTACG GCTACCAATC CCAAGTCTAT TGCCTTTTTC TGCGCCTTCA TGCCTCAGTT CATCAATCAC GCCGAACCGG TCATGGCTCA AGTCCTCATC CTTGGATCGA CCTTTGTGAT CCTGGCGGTA GTCAACGCCA CTTTGTACGC GCTTCTGGCG GCCAGGGCGC GATACGCAGT GACGAATCCC CGGATCATGA AGATGGTCAA CTGGGCAGGT GGCTCTGCCC TGATCGGCGC GGGGGTTTTG ACCGCTGCCA TACGGCGGAC GTGA
|
Protein sequence | MSPDTYLAFL LATIVVLVIP GPTIMLVVSC SLTQGKRLAL PLALGVGLGD TVAMIASMAG LGALLATSAT LFTVLKWVGA FYLVYLGVKT FRTNPVSGKD LPRVASVSRG ASVFRAFAVT ATNPKSIAFF CAFMPQFINH AEPVMAQVLI LGSTFVILAV VNATLYALLA ARARYAVTNP RIMKMVNWAG GSALIGAGVL TAAIRRT
|
| |