| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1346 |
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| Symbol | |
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| ID | 8377011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 1515886 |
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| End bp | 1516500 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645000574 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003157860 |
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| Protein GI | 256829132 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | [TIGR01168] Gram-positive signal peptide, YSIRK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.068712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGCT CCACCATAGG CGTCCATTCA ATTCTTGTCG TATTCCTCAC ACTTTTCACT
GTAGGCAATT GTCAGGCGGC AGCGACGATC TCCGGGTCTG AAGATGCTTA CGGCCAGCCG
GGTAAAAATA ACGTGTCGAT CGCGTCAATG GAGGCGAAAC GCCACATGGA CGGAGGCCGC
AAACTGGAAC GGGAGCGGAA TCTCCAAGGA GCCATAGCAT CCTATTCCAA GGCTGCCAGC
CTTGCTCCCG AATCTGCGGA AGTGCATTTT GCCCTTGGCG AAGCCCTGGC CAAAGCCGAA
AATTATCAGG AGGCCCTGGT CAGGTACACG CTGGCGGTCA CCATCGCCCC TACCCATACC
AAGGCCCTCT ATGGCCGATC CCAACTTTGT CTGCGCATGG CGCTCTACGG CCAGGCCATC
AAAGATCTGA GCCAACTGAT AGAACTCGTG CCGGGAGTCG CGGACTACCA CTACCAACGC
GCAACCACTC TCATGAAGCT CAAAAACATA ACCGAGGCTT ACCACGATTA CTTGCGGGCG
CATGAACTCA ACAAGAAATA CCCCCGTCCC ACGCTGATGT GGAAAAAGGG GTCCATCTCA
TCAAAAAGCG TTTAA
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| Protein sequence | MKSSTIGVHS ILVVFLTLFT VGNCQAAATI SGSEDAYGQP GKNNVSIASM EAKRHMDGGR
KLERERNLQG AIASYSKAAS LAPESAEVHF ALGEALAKAE NYQEALVRYT LAVTIAPTHT
KALYGRSQLC LRMALYGQAI KDLSQLIELV PGVADYHYQR ATTLMKLKNI TEAYHDYLRA
HELNKKYPRP TLMWKKGSIS SKSV
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