Gene Dbac_1344 details

Gene Information

• Locus tag: Dbac_1344
• ID: 8377009
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 1514704
• End bp: 1515417
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 645000572
• Product: secretion protein HlyD
• Protein accession: YP_003157858
• Protein GI: 256829130
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0845] Membrane-fusion protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.44179
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGCA TATTTTTCCT TGCACTGTTG TGCATGATGG CCGCCACGGT TTGGGCCGGG 
GACCTGCCGC CCTTCGAAGG GCTTATCGAA CCTCGGGAGA CCGTCAATTT CGGCAGCCAG 
GTTCCGGGCA TCCTGGAGAA GGTCATGGTC GAGCGGGGAG ACAAGGTTGA GGTCGGGCAG 
ATCCTGGCCC GGCTCAAATC CGGGGTCGAA GCCGCAGCCC TGCGCACGGC CGAGGCCAAG 
GTGGATTTCG GGCAGCGCAC GTCCCAGCGC AACGAGGAAC TGACCAGAAA AAAGCTCATT 
TCGGTGCATG AAAAAGACGA GATCGAGACC GAACTGCAGC TGGCCCGACT GATGGTGGCC 
GAGGCCAAGG CGCAGCTCGA AATGCGGGTC ATCCGCAGTA CGATCAAGGG CGTGGTGGTC 
AAGCGCACGG GAGCGCCCGG CGGCTATGTC GGAGAGGAAC CCTTTCTGAC CGTGGCGCAG 
ATCGACCCTT TGAGCGTCGA GTTGGTCATC CCGGTCCAGT ATATCGGGTC CATCAAGGAA 
GGGGTGACGG CCAAGGTCCT GCCGGACGAG CCGGTGGGCG GCGAGTACAG CGCCAAGGTC 
GTGGTCGTGG ACAAGGTCAT CGATGCCGCC AGCGGAACCT TCGGCGTGCG CCTGGAACTT 
CCCAACCCAA AGCTTCGGCT GCCGGCGGGG ATGAAGTGCC GAGTGATCTT TTGA 

 

Protein sequence

MKRIFFLALL CMMAATVWAG DLPPFEGLIE PRETVNFGSQ VPGILEKVMV ERGDKVEVGQ 
ILARLKSGVE AAALRTAEAK VDFGQRTSQR NEELTRKKLI SVHEKDEIET ELQLARLMVA 
EAKAQLEMRV IRSTIKGVVV KRTGAPGGYV GEEPFLTVAQ IDPLSVELVI PVQYIGSIKE 
GVTAKVLPDE PVGGEYSAKV VVVDKVIDAA SGTFGVRLEL PNPKLRLPAG MKCRVIF