Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1337 |
Symbol | |
ID | 8377002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 1477492 |
End bp | 1478670 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645000565 |
Product | integrase family protein |
Protein accession | YP_003157851 |
Protein GI | 256829123 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0155558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAGG AAAAGCGCGA GAAGTCGAAG AAATATCCAG GCGTATATTG GCGTAAAAAT CCCGAGAATG GCGAAAAGAC CTATTACATT CGCTATCGGC TCGGGGGGCG TGGTTCCAAG GAAATCGAAG AGCCCGTGGG GAAGTCCACA TCCGCCATGA CTGAAGCCAA GGCATCCCAG GCAAGGGCTG CACGCATGAC GGGGCAAACC TTGCCCAACA CAGAGCGCAG GACGCAGGAG AAGGCCGCCC AAGAAGCCAT TACCGGGCGC TGGACAGTCC AGAAGATCTG GGATGAATAC GATGATGCAC ACAAGGACCG GGCCTGCGCT AAGCCGGACG CGTCCTATGC AAACCGCCTC CTGCCCGAAC TTGGCGAGAA GACCCCTTCC GAAATCGTGA CGCTGGACCT TGAACGTCTG CGCCGGAATC TGGCCAAGAC GAAGAGCCCC AGAACGCGCA AGACCCTCTC CGCTCAGACC CAGAAACACG TCCTGGCCCT GCTCAAGCGC ATGCTCAGGT GGGCGGCGGA CATGGGACAT ATTGATCCGC CAGTGCACCT CAAGTTCCGC ATGCCGACCG TAGATAACGA AAAGACCGAG TTCATGACCG AGGACCAGCT TTCGGCATAT CTTAAAGCAT TGGATGAAGA ATCGAACCAG CACTGCGCGG CCTTTTTCCG CATCGCACTT TTGACAGGGA TCAGGCGGAC CGCCCTTCTC AACGTCATGT GGTCAGACGT GGATCTCGAG AATGGATTCC TGACCCTGCG CGGGGCCACG GCAAAGAACG AAAAGACGCA GACCATACCC CTCTCCCCCG GCGCGGTGGA GGTGTTGAAA GGCATCGTGC GCCCGAACTC TCCTTACATC TGGCCAGGCC AGAATGGAGG CGCCAGAGAA GACATGCGGC GCATGGGACG ACGACTCAGG GACAAAGCCG GACTCCCGGC GGACTTCCGT CCGGTGCATG GACTCCGGCA TCATTTTGCC AGCCATCTGG CCAGTTCAGG CGCGAGCCTG TATGAGGTGG GCACGCTCCT GACTCATGGC GACCTCAGCG TGACGAAACG GTATGCACAT CTCTCCGACC AGGCGCTGCG GCGTGCCGCT TCTCTTGCGG ATGACATGGT GAAGGTGAAG AAAAAGGCCA CAGTCTCAAA AATCAACGCC GAAAAATAA
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Protein sequence | MTEEKREKSK KYPGVYWRKN PENGEKTYYI RYRLGGRGSK EIEEPVGKST SAMTEAKASQ ARAARMTGQT LPNTERRTQE KAAQEAITGR WTVQKIWDEY DDAHKDRACA KPDASYANRL LPELGEKTPS EIVTLDLERL RRNLAKTKSP RTRKTLSAQT QKHVLALLKR MLRWAADMGH IDPPVHLKFR MPTVDNEKTE FMTEDQLSAY LKALDEESNQ HCAAFFRIAL LTGIRRTALL NVMWSDVDLE NGFLTLRGAT AKNEKTQTIP LSPGAVEVLK GIVRPNSPYI WPGQNGGARE DMRRMGRRLR DKAGLPADFR PVHGLRHHFA SHLASSGASL YEVGTLLTHG DLSVTKRYAH LSDQALRRAA SLADDMVKVK KKATVSKINA EK
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