Gene Dbac_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1337 
Symbol 
ID8377002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1477492 
End bp1478670 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content58% 
IMG OID645000565 
Productintegrase family protein 
Protein accessionYP_003157851 
Protein GI256829123 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0155558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAGG AAAAGCGCGA GAAGTCGAAG AAATATCCAG GCGTATATTG GCGTAAAAAT 
CCCGAGAATG GCGAAAAGAC CTATTACATT CGCTATCGGC TCGGGGGGCG TGGTTCCAAG
GAAATCGAAG AGCCCGTGGG GAAGTCCACA TCCGCCATGA CTGAAGCCAA GGCATCCCAG
GCAAGGGCTG CACGCATGAC GGGGCAAACC TTGCCCAACA CAGAGCGCAG GACGCAGGAG
AAGGCCGCCC AAGAAGCCAT TACCGGGCGC TGGACAGTCC AGAAGATCTG GGATGAATAC
GATGATGCAC ACAAGGACCG GGCCTGCGCT AAGCCGGACG CGTCCTATGC AAACCGCCTC
CTGCCCGAAC TTGGCGAGAA GACCCCTTCC GAAATCGTGA CGCTGGACCT TGAACGTCTG
CGCCGGAATC TGGCCAAGAC GAAGAGCCCC AGAACGCGCA AGACCCTCTC CGCTCAGACC
CAGAAACACG TCCTGGCCCT GCTCAAGCGC ATGCTCAGGT GGGCGGCGGA CATGGGACAT
ATTGATCCGC CAGTGCACCT CAAGTTCCGC ATGCCGACCG TAGATAACGA AAAGACCGAG
TTCATGACCG AGGACCAGCT TTCGGCATAT CTTAAAGCAT TGGATGAAGA ATCGAACCAG
CACTGCGCGG CCTTTTTCCG CATCGCACTT TTGACAGGGA TCAGGCGGAC CGCCCTTCTC
AACGTCATGT GGTCAGACGT GGATCTCGAG AATGGATTCC TGACCCTGCG CGGGGCCACG
GCAAAGAACG AAAAGACGCA GACCATACCC CTCTCCCCCG GCGCGGTGGA GGTGTTGAAA
GGCATCGTGC GCCCGAACTC TCCTTACATC TGGCCAGGCC AGAATGGAGG CGCCAGAGAA
GACATGCGGC GCATGGGACG ACGACTCAGG GACAAAGCCG GACTCCCGGC GGACTTCCGT
CCGGTGCATG GACTCCGGCA TCATTTTGCC AGCCATCTGG CCAGTTCAGG CGCGAGCCTG
TATGAGGTGG GCACGCTCCT GACTCATGGC GACCTCAGCG TGACGAAACG GTATGCACAT
CTCTCCGACC AGGCGCTGCG GCGTGCCGCT TCTCTTGCGG ATGACATGGT GAAGGTGAAG
AAAAAGGCCA CAGTCTCAAA AATCAACGCC GAAAAATAA
 
Protein sequence
MTEEKREKSK KYPGVYWRKN PENGEKTYYI RYRLGGRGSK EIEEPVGKST SAMTEAKASQ 
ARAARMTGQT LPNTERRTQE KAAQEAITGR WTVQKIWDEY DDAHKDRACA KPDASYANRL
LPELGEKTPS EIVTLDLERL RRNLAKTKSP RTRKTLSAQT QKHVLALLKR MLRWAADMGH
IDPPVHLKFR MPTVDNEKTE FMTEDQLSAY LKALDEESNQ HCAAFFRIAL LTGIRRTALL
NVMWSDVDLE NGFLTLRGAT AKNEKTQTIP LSPGAVEVLK GIVRPNSPYI WPGQNGGARE
DMRRMGRRLR DKAGLPADFR PVHGLRHHFA SHLASSGASL YEVGTLLTHG DLSVTKRYAH
LSDQALRRAA SLADDMVKVK KKATVSKINA EK