| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1337 |
|---|
| Symbol | |
|---|
| ID | 8377002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 1477492 |
|---|
| End bp | 1478670 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645000565 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003157851 |
|---|
| Protein GI | 256829123 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0155558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGG AAAAGCGCGA GAAGTCGAAG AAATATCCAG GCGTATATTG GCGTAAAAAT
CCCGAGAATG GCGAAAAGAC CTATTACATT CGCTATCGGC TCGGGGGGCG TGGTTCCAAG
GAAATCGAAG AGCCCGTGGG GAAGTCCACA TCCGCCATGA CTGAAGCCAA GGCATCCCAG
GCAAGGGCTG CACGCATGAC GGGGCAAACC TTGCCCAACA CAGAGCGCAG GACGCAGGAG
AAGGCCGCCC AAGAAGCCAT TACCGGGCGC TGGACAGTCC AGAAGATCTG GGATGAATAC
GATGATGCAC ACAAGGACCG GGCCTGCGCT AAGCCGGACG CGTCCTATGC AAACCGCCTC
CTGCCCGAAC TTGGCGAGAA GACCCCTTCC GAAATCGTGA CGCTGGACCT TGAACGTCTG
CGCCGGAATC TGGCCAAGAC GAAGAGCCCC AGAACGCGCA AGACCCTCTC CGCTCAGACC
CAGAAACACG TCCTGGCCCT GCTCAAGCGC ATGCTCAGGT GGGCGGCGGA CATGGGACAT
ATTGATCCGC CAGTGCACCT CAAGTTCCGC ATGCCGACCG TAGATAACGA AAAGACCGAG
TTCATGACCG AGGACCAGCT TTCGGCATAT CTTAAAGCAT TGGATGAAGA ATCGAACCAG
CACTGCGCGG CCTTTTTCCG CATCGCACTT TTGACAGGGA TCAGGCGGAC CGCCCTTCTC
AACGTCATGT GGTCAGACGT GGATCTCGAG AATGGATTCC TGACCCTGCG CGGGGCCACG
GCAAAGAACG AAAAGACGCA GACCATACCC CTCTCCCCCG GCGCGGTGGA GGTGTTGAAA
GGCATCGTGC GCCCGAACTC TCCTTACATC TGGCCAGGCC AGAATGGAGG CGCCAGAGAA
GACATGCGGC GCATGGGACG ACGACTCAGG GACAAAGCCG GACTCCCGGC GGACTTCCGT
CCGGTGCATG GACTCCGGCA TCATTTTGCC AGCCATCTGG CCAGTTCAGG CGCGAGCCTG
TATGAGGTGG GCACGCTCCT GACTCATGGC GACCTCAGCG TGACGAAACG GTATGCACAT
CTCTCCGACC AGGCGCTGCG GCGTGCCGCT TCTCTTGCGG ATGACATGGT GAAGGTGAAG
AAAAAGGCCA CAGTCTCAAA AATCAACGCC GAAAAATAA
|
|---|
| Protein sequence | MTEEKREKSK KYPGVYWRKN PENGEKTYYI RYRLGGRGSK EIEEPVGKST SAMTEAKASQ
ARAARMTGQT LPNTERRTQE KAAQEAITGR WTVQKIWDEY DDAHKDRACA KPDASYANRL
LPELGEKTPS EIVTLDLERL RRNLAKTKSP RTRKTLSAQT QKHVLALLKR MLRWAADMGH
IDPPVHLKFR MPTVDNEKTE FMTEDQLSAY LKALDEESNQ HCAAFFRIAL LTGIRRTALL
NVMWSDVDLE NGFLTLRGAT AKNEKTQTIP LSPGAVEVLK GIVRPNSPYI WPGQNGGARE
DMRRMGRRLR DKAGLPADFR PVHGLRHHFA SHLASSGASL YEVGTLLTHG DLSVTKRYAH
LSDQALRRAA SLADDMVKVK KKATVSKINA EK
|
|---|
| |