Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1264 |
Symbol | |
ID | 8376929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1396908 |
End bp | 1399475 |
Gene Length | 2568 bp |
Protein Length | 855 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645000496 |
Product | ATPase associated with various cellular activities AAA_5 |
Protein accession | YP_003157782 |
Protein GI | 256829054 |
COG category | [R] General function prediction only |
COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.099049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGTTT CACTTCATAT TGATAGTCCC GCGATTCTGT TCGCGATTTC TGAAGATCTT CAGGCCACTT TGGCGGCCTC GGTCAGCATT GGTCAACACA TGCCTGGCGA ATCGTGTCTC ATGACGCATT CAGAGGTGGA CGCGGCGTTT GTCTCGCAAT TCTACGGGGT GATTTCGCCG ATGAAGGTGA AGCATGTGGT CGATGACGGT CTTTCCCCCC TGGAGGTGCG ACTCATCCTG AACGTGGAGG AAGGTCTCAG GCAAACGAGC TTGGGCATCA GTTCGGACAA CCCTGCACTC ATCGACGAAT TGACCACTTC ATGTCTTGGG CCTCTCGGCG TGGTCGCGGG TGCCCCATCG CTGCGCGTAG TCTCGGAGAA CACGATTACG GCTCAGCATG ACAATGTTGC GGTTCAGACC ATCCAATGGT GGCTTAAACG CCGTGGCATA GTCACGCGAC TTTCGCAGTC ATTTTTCTCA GAATCTGGCC TGGCCATCAA GGAATATCGT CCCGAATACG CGGATATTCG CCCGCGCATG CCATTGACGA TACACACTGA CAACATGCTT GCGGGTCAGG CATTGCTGGA ACTTCTGGAA CAGTCCGGAT TTCTTGTTGC AGGAGTCGTA CACAAGGATT TCGGGGACCA GGGGGACGAT CGGCTTGGAG TGAAAAGCCC CTGGTTCGGA TTGGAGAGCT CGAGACGTGA AAAAGTGGAT CTTGCCAACG TCATCAGCCA GTTCGCCCGG GACCACGGAA TCCAGCTTGA CGCCTACCCC GTTACGCTCG AGCACGAATT ATCGAGTAAC ACCATGTCGG ACGTTTTTCT GCCTTTCGAT GCATGCAGGG ATCGGCGAAT GTGCGCATAC GGCGGACCGT ATCCTGATCG CCTGAGCGCG CGTATCGAAA CCGACAGTCC TGAAGCCGGC AAGCGGCTTG AAAGACGTCT GCAAGCTCTG GGGATAAGAA AAATCAAGGT TGCCAACATC GATGAAGATG ATCTGAAGAA GGGGCACTGC CTCTATGCGG GCGAACTTCC TCTTTTTTCG ACAATCAAGG AGCAGATTTG TCTGGAAATC AGAGAAGAGC TGGATTCCAT GAGCGGCCAT GCGTTTCCCA TTCGTTCTCG GGACAATACT GTCAGCTCGG ACGACATGGT GATTCGCTTT CCCGCCATTG GTATCGAGGA CGGAACGCTG CTTGAATTCA TGAGCTCTCC CAGACACTTC AACCTCACGG TCCGGTGTGA GGACAAGAAT GGCTGGAAGG ACTGCATCAA TGAGCTGCAA GGGATGGGCT TTGCGCAGTT TGGCGTCAAG ACGGAAGAGA ACTCGGAGAA ACTGCTGAAA TACGGCATGG CCTCAGAAGG GGTGCGCAAG CTGGTGGGCG AAGTGGTCGC CAGGCATGGA GTACCGGACC TTCGCGAAGA GAAGGCCTGG GACGATGACG ATAATGACCT GTGGGTCTAT TTGCCTATGA AGGCGGAAGG CGTCGAGGCA AAACAGCAGA AAGAGCTGGC GCTGCAAAAA AACGATACGC AATTGTATTG GGAACAGGAG CGTTTGGCGG GAGTCAGGGC GCTGGTCATC GGCCTGAGAG AGACGCGTGT CCCCTGCGAT AGCCGTTGGG CGCATCTGGT ACCGCATAAG GAGCAGTTTC GCCATTATTG CCTGACGAAT CGCACCCTGG GGATCATGCG TTACGTCCTG AAACGCGTGG AAATGGGGGA GCCCTGCCTG CTGGAGGGTG GCGCGGCAAC CTCGAAGACG TCCGCAATTC TGTTCCTTGC GGCCATGCTC GGACAGCCGG TCGTCAGGAT CAATCTTAAC GGGCAGACGG ATACGGGAGA GCTGATCGGA AAATTCGTCC CCGATACGGA AAGCAAGCAG GGTATGGGAT GGAAGTGGCA GGAAGGCATC TCCCTGGCCA TGCGCCACGG GTTCTGGGTC GTACTCGACG AAATGAACCT TGCTGATCCG CAGGTGCTGG AGCGCCTGAA TTCGGTTCTT GAAATGCCTC CGTCTTTGGT GATCAGCGAG TATGACAATT CGGTTGTCGG AGGGGGCGCT TGTCCCGTGC ATCCGAACTT TCGGATACTG GCTACAATGA ATCCTCCGAG TTTTGTCGGA AGAAACCAGC TCTCCAGGGC TTATGAGAGC AGATGGGTCG GGACACTCCG CATTCCTGAC CCCGAGGAGG CCGAATACTG CCAGATCCTC AAGACCGCAA TATTCGGTGG GTTGCGTTGG GGTTATGCCC ATCTTGATGA TGCGAGGAAA GCCCCTGCAT GTGCATCACT GCAAGCTTTG CCGAACATCG AGCAAGTTTG CCATGACCTT GGGAAATTCC ATCACTTGGT GGCGAGAGGG GAAAAGGATA AAGGAGCAGT CAGTCTGAGG AAGCTGCTGG CATTGGCTCA TTATCTGGTG GGTGCCGACC CTGCGTCGTT TCGAAGCAGG ATTCGCGATG GTATTTTCGA CTATTATATC GGGTCCGCCC GGTCTCCGGA GGATTCGCAA GCCATAAGTC TGCTCGCGAA AAGCTGCAAT TTGCAGGAGG TCGCATGA
|
Protein sequence | MKVSLHIDSP AILFAISEDL QATLAASVSI GQHMPGESCL MTHSEVDAAF VSQFYGVISP MKVKHVVDDG LSPLEVRLIL NVEEGLRQTS LGISSDNPAL IDELTTSCLG PLGVVAGAPS LRVVSENTIT AQHDNVAVQT IQWWLKRRGI VTRLSQSFFS ESGLAIKEYR PEYADIRPRM PLTIHTDNML AGQALLELLE QSGFLVAGVV HKDFGDQGDD RLGVKSPWFG LESSRREKVD LANVISQFAR DHGIQLDAYP VTLEHELSSN TMSDVFLPFD ACRDRRMCAY GGPYPDRLSA RIETDSPEAG KRLERRLQAL GIRKIKVANI DEDDLKKGHC LYAGELPLFS TIKEQICLEI REELDSMSGH AFPIRSRDNT VSSDDMVIRF PAIGIEDGTL LEFMSSPRHF NLTVRCEDKN GWKDCINELQ GMGFAQFGVK TEENSEKLLK YGMASEGVRK LVGEVVARHG VPDLREEKAW DDDDNDLWVY LPMKAEGVEA KQQKELALQK NDTQLYWEQE RLAGVRALVI GLRETRVPCD SRWAHLVPHK EQFRHYCLTN RTLGIMRYVL KRVEMGEPCL LEGGAATSKT SAILFLAAML GQPVVRINLN GQTDTGELIG KFVPDTESKQ GMGWKWQEGI SLAMRHGFWV VLDEMNLADP QVLERLNSVL EMPPSLVISE YDNSVVGGGA CPVHPNFRIL ATMNPPSFVG RNQLSRAYES RWVGTLRIPD PEEAEYCQIL KTAIFGGLRW GYAHLDDARK APACASLQAL PNIEQVCHDL GKFHHLVARG EKDKGAVSLR KLLALAHYLV GADPASFRSR IRDGIFDYYI GSARSPEDSQ AISLLAKSCN LQEVA
|
| |