Gene Dbac_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1232 
Symbol 
ID8376896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp1361308 
End bp1361874 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content62% 
IMG OID645000464 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_003157751 
Protein GI256829023 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTTG AGCGACGTAT AATTCTGGCC ATTTCCGGGG CTAGTGGAAT GGAGTATGCT 
CGACTCCTGG CGCGGGCCTT GCGCGAGGCT CCGGGGCTTG AGTTGCATGG GATCATCTCC 
GACGGGGCGC GTCAGGTCTT TCGGCATGAA CTCAATTCGG ACCCGCTTGA TCTGGAGTCC 
TGCTTTCATT TCCTGCATGA CCCCGCCAAT ATCGCGGCCG CTCCTGCCAG TGGTTCCTGG 
GAGCACTCGG GCATGATCGT CTGTCCGTGC TCCATGGCCA GTCTCGCCGC CATCGCCACC 
GGGGTCGGTT CCAATCTGCT GCATCGCGCC GCCGACGTGA CCCTCAAAGA GCGTCGCCCG 
CTGATTCTGG TGCCGCGCGA AACGCCCTTG AGCGAGATCC ATCTCAAGAA CATGCTTCGC 
GCCCATCGGG CCGGAGCCGT GATCATGCCG CCATGTCCCG GATTCTACCA TCGTCCGGAA 
TCAATCGAGC AGCTCGTGAG CCAGTTCGTG GGCCGCATCC TCGAACAGCT CGGATTGCCC 
CACGGCCTCT ACACCCGCTG GAGCTAA
 
Protein sequence
MTVERRIILA ISGASGMEYA RLLARALREA PGLELHGIIS DGARQVFRHE LNSDPLDLES 
CFHFLHDPAN IAAAPASGSW EHSGMIVCPC SMASLAAIAT GVGSNLLHRA ADVTLKERRP 
LILVPRETPL SEIHLKNMLR AHRAGAVIMP PCPGFYHRPE SIEQLVSQFV GRILEQLGLP 
HGLYTRWS