| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1225 |
|---|
| Symbol | |
|---|
| ID | 8376889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 1353740 |
|---|
| End bp | 1354399 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645000457 |
|---|
| Product | phage shock protein A, PspA |
|---|
| Protein accession | YP_003157744 |
|---|
| Protein GI | 256829016 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | [TIGR02977] phage shock protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.374246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTAT TTACCAGATT TAAAGACATT ATCGGTTCCA ATATCAATTC CATGCTGGAC
AAGGCCGAAG AGCCGGAAAA GATGATCCGG CTCATGATTC AGGAGATGGA AGAGACCTCG
GTGGAGCTCA AGGCCGCCTG CGCCGGACTC ATGGCCGATC AGAAGCGCAT TGCCCGCGAA
CTGTCGCAGA TCGGCGAGCG CGCGGAACTC TGGAACAACA GGGCAAAGCT TGCCATGGAA
AAGGGACGGG AAGATCTGGC CCGGGAGGCA CTCCTCGAAA AACTGAGCGC CCAGCGCCTG
AGCGAGGGGC TGGAGCGGGA GAGGGACCGT TTCGCGGTGC TGATCGAACA GGCCCGTGAA
GACATCGAGC AGCTCGAAGC CAAGCTCGAA TCTGCCAAGG AGCGCCAGCG CAGCCTGGCC
AAGCGCCATG TGCGAGCGGA CCAGCGCATT AAGGCCCGCT CCAATGTCTC GCGGGTCCAG
TCCAGCGACG TGATGATGCG TTTCGATCAG TTCGAGCAGC GCATCGAACG CATGGAAGCC
GAGGCCGAAC TGGCCGCGCC GCGCCAGAAC CGGAACCTGG AACAGGAATT CGCCCTGCTT
GAGGGCGGCG ACGAAGTCGA AGAACAGCTC GCCTCCATGC GCTCCGCCGC CAAGGAATAG
|
|---|
| Protein sequence | MGVFTRFKDI IGSNINSMLD KAEEPEKMIR LMIQEMEETS VELKAACAGL MADQKRIARE
LSQIGERAEL WNNRAKLAME KGREDLAREA LLEKLSAQRL SEGLERERDR FAVLIEQARE
DIEQLEAKLE SAKERQRSLA KRHVRADQRI KARSNVSRVQ SSDVMMRFDQ FEQRIERMEA
EAELAAPRQN RNLEQEFALL EGGDEVEEQL ASMRSAAKE
|
|---|
| |