Gene Dbac_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1223 
Symbol 
ID8376887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp1352997 
End bp1353440 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content64% 
IMG OID645000455 
Productphage shock protein C, PspC 
Protein accessionYP_003157742 
Protein GI256829014 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID[TIGR02978] phage shock protein C 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.238052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGCTT TCGGACGCGG CACCGGCCGC ATGCGTGGCG GCGGATATCA AGGATCGCGC 
TGGCAGCGCC CCATGGATGA ACAGCGCGGC CTCTACCGGG CCCGGAACGG GGTTTTTCTC 
GGCGTGTGCA AAGGCATCGC CCGATACTTC GACTTCGCTC CCGGTGCGGT GCGGGCCGTC 
GTCATCCTTC TCTTCCTGGT CACCGGCATC TGGCCGGTCG GGCTCTTGTA CCTCATCGCG 
GCCATGGTCA TGAAGATGGA GCCGGTGGTG CCCTTCGACA GCCCCGCGGA CCAGGAATTC 
TACAATTCCT ACACCAGCTC CCGGGCCGGG GCCCTGGAGC GGATCAAACG CAAATTCGAC 
AGCCTGGACC GCAGGCTCCG GCGCATGGAG GACGTGGTCA CCAGCCGCGA TTTCGAGTGG 
GAACGACGTA TGCGCAATTC CTAG
 
Protein sequence
MRAFGRGTGR MRGGGYQGSR WQRPMDEQRG LYRARNGVFL GVCKGIARYF DFAPGAVRAV 
VILLFLVTGI WPVGLLYLIA AMVMKMEPVV PFDSPADQEF YNSYTSSRAG ALERIKRKFD 
SLDRRLRRME DVVTSRDFEW ERRMRNS