Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1221 |
Symbol | |
ID | 8376885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 1347995 |
End bp | 1351129 |
Gene Length | 3135 bp |
Protein Length | 1044 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645000453 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003157740 |
Protein GI | 256829012 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.227424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGCAG ATGACCAACC CGCCCCCCAT GACATTTCGC GTACCCTGCT CCACGTCACC CTGTGGACAT TTCTCCTGGT CGTGCTTTTC TCCATCAGCC GTCACAATTT CCTCCTTTTT CACACTCTGG CCGAACTCTT CTCCGTGGCT GTGGGCTGGA GCGTTTTGCT GCTGGTCTGG AACACGCGCG CCTTTCTGCG CAACGATGCC CTTCTGTTCC TGGGCATCGC CTACTTTTTC ATCGCCCTGC TCGACCTGAC TCACACCCTG GCCTACAGTG GAATGAACAT CTTCGCGTCC GTAAAGGACG CAAACCCGGC CACGCAACTC TGGATCGCGG CCCGAGGGCT GGAAGCGGCC AGTCTCTTTG CCTACAGCCT GATGCTGGGA CGCGGTTTTT CCCTGTGGTC GTTGCTCGCG GTCCTCTCCG CCATAACGTC GGCCTTGTTG CTGAGCATCT TCGTCTGGGA TATTTTTCCG GTCTGCCACA TTGAAGGGGT GGGACTGACG ACGTTCAAGA TCGCCGCCGA ATACGCCGTC AGCGCTGTAC TGGCGGTGAC CATGCTCAAT CTGACACTGC AGCGAGACAA ACTCGAACCC GGCATCTACC ACCTGCTGAT CATTTCCATA GCCCTGAGCA TCGTGGGCGA ATCGGCCTTC ACGTTCTACG TAAATGTGTA CGGCCTCTCC AATGTTATCG GTCATTTTCT GAAGATCGTA TCCTTTTTCC TGATCTATCT GGCCCTGGTC CGTTTCGCCT TGAAACGCCC CTATCAGACC CTTTTCAGGC AACTTGCCCA GGAACGCGAA GCCTTGGCGC GTTCGGAAGA AAAATGGCGG AACATTCTGG TACACACGCC GCAGATCGGC ATCTCCCTCG ACCCCAAGGG ACGAATCGTC TTCGCCAACG AATATTTTCT CAAGCTGACC GGATGGGAGC AGGAAGAGGT GCTGGGTCGG GACTGGTTTG AAGTGTGCAT TCCTGTCGAG ATCCGCGAGT CGACCCGCGA ATTTTTCGAT TCCGTCATGG CGGGTGGACA AAGCCTGGCC TACTCCACGC ATGAAAATGA GATCATAGGC AAAAACGGCG CCCGCCACAC CATCGGCTGG GCCAACGCGG TGGCCTTCGA TTCATCGGGC CTGCCCACGG ACGTGACCAG CCTCGGCGTC GATCTGACGG AACGCAAACA CGCGGCAGAG GTGCTGGTCG AGAGCAGAAA TCTATACCAG TCTCTGGTGG ACAACCTGCC GCTTTCGATC ATGACCTTTG ATCGCGATGG AAAAATCAAT TACATCAACC AGTTTCACAT TGACAGTTTT GCCAAAGGCC GTCTGGATAA AGAATATTTT CTGGGCCGGG CCCTGCATGA ACTACCCGGT CTGGTCTCCG CGGGGATCGG TCCTGAGCTG AAAGAGGTGC TTCAGGGCCG CCCCGTAAGC CTGCCAAGCC TTTTCATCCC CCGCCTCGCC GCCGGCGGTT CGGCCTGGCA AAGCGTCAAG GCCATCCCCC TGTTCAAGGA CGGCATCTTC TCCGGCGGCA TCCTCATGCG CGAAGACATC ACCGCCCGCA AAATGTCCGA GGAGGCCGTG CGCCAGAGCG AAGAGCGGCT GGCCCTGGCC CTGGAGGTCA CCAACGACGG GCTCTGGGAT TGGGATTGCG TATCGGGCAG CACATATTTC AGCCCCCACT ACTATGCCAT GCTCGGCTAC GAACCCGGGG AGTTCGAAGC GAACTACGCT ACATGGCGAA GTCTTATCCA TCCCGACGAT GTGCTTGCTG TCGAAGACGA AGTAAGCCGC CATGTCGCCA GCGGGCAGGT TTTCGAGATC GAATTTCGCA TGAAATCCAA ATCCGGACAA TGGCAGTGGA TCATGGCGCG TGGCCGGGTG GTTGAAAAAG ACGAACAGGA CCATGCCGTG CGCATGGTGG GCACGCATGT GGACGTGACC GAGCGGAAGA ACGCGGAATA TGTCGCGCTA CGCGCCAAGG AGGCCGCCGA GGCGGCAAAC AGGGCCAAGA GCGAATTTCT GGCCAACATG AGCCACGAGA TACGCACCCC GTTGAACGGC ATCATGGGTA TGCTGCAGCT CCTGCAGACC ACAAGTCTGA ATCATGAACA GCTCGAATAC AGCTCCATGG CCGTGCAATC GACCTCCCGC CTGACCAGCC TGCTTTCCGA CATTCTCGAC CTCTCCCGGG TGGAAGCAGG CAAGATGCCC ATTCGGCCCG AAGTCTTCGA CCTGCGCAAA AAACTCCATC AATCCATCGA TCTCTTCGCG TCCATCGCCC TGCAGTCTGG TGTCGAGCTG CGGCATCATT TCGACGACAC ACTGCCGCAA CACGTCATCG GCGACCCTCT CCGCCTGCAA CAGGTGCTCA CGAACCTGAT CGGCAATGCC TTCAAGTTCA CAGAGCGCGG CTTCGTCAGC GTGGAGGCCT ACCCTTTGCC GGCCCGTAAC GAAAACCAGC TGCGCATATT CTTCGAGGTT TCGGATTCGG GGTGCGGCAT CCCCGATGAA GCGCTGGGCC TGCTCTTCGA GCCTTTCAGC CAGGTAAGCC AAGGCTACAC CAGACAATAC CAAGGCGCGG GCCTTGGCCT GTCCATCTGC AAGCGCCTGG TCGGGCTGAT GGGCGGCAAC ATGGCCATTT CAAGCGAGGT CGGCGTGGGA ACAAGCATCT ATTTCTGCGT CACCCTGGAC AAGGCACTTA AACTGCCGGC CCAGGATTCT TCAGCTCAGA CGAAAACAGC GCTGAGGCCG AGGAAAATAC TCGTGGCCGA AGACGATGAG GTGAACCTTT TCGCCGTCCG CAATCTGCTG ACTAAAAACG GCCACGAGGT CGTCACCGCC CATAACGGGC ATGAGGTGCT GGAGCGCATC ATGGAGCAGG ATTTCGACCT CGTCCTGATG GATATTCAGA TGCCGGAAAT GGACGGAATC GAGGCCACCA GGCGCATCCG CGTCACTGAG CAGGCCACCG GCAAAAAACC AGTGCCGATC ATCGCCATGA CCGCCTACGC CATGAACGGA GACAGGGAGA AGCTGCTGGA CAAGGGCGTG GACGGCTATG TGTCCAAACC CTTCAGCATC AAAACGCTCA TGGAAGTGAT AAAGGAAAAC GCCAACATAG GCTGA
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Protein sequence | MLADDQPAPH DISRTLLHVT LWTFLLVVLF SISRHNFLLF HTLAELFSVA VGWSVLLLVW NTRAFLRNDA LLFLGIAYFF IALLDLTHTL AYSGMNIFAS VKDANPATQL WIAARGLEAA SLFAYSLMLG RGFSLWSLLA VLSAITSALL LSIFVWDIFP VCHIEGVGLT TFKIAAEYAV SAVLAVTMLN LTLQRDKLEP GIYHLLIISI ALSIVGESAF TFYVNVYGLS NVIGHFLKIV SFFLIYLALV RFALKRPYQT LFRQLAQERE ALARSEEKWR NILVHTPQIG ISLDPKGRIV FANEYFLKLT GWEQEEVLGR DWFEVCIPVE IRESTREFFD SVMAGGQSLA YSTHENEIIG KNGARHTIGW ANAVAFDSSG LPTDVTSLGV DLTERKHAAE VLVESRNLYQ SLVDNLPLSI MTFDRDGKIN YINQFHIDSF AKGRLDKEYF LGRALHELPG LVSAGIGPEL KEVLQGRPVS LPSLFIPRLA AGGSAWQSVK AIPLFKDGIF SGGILMREDI TARKMSEEAV RQSEERLALA LEVTNDGLWD WDCVSGSTYF SPHYYAMLGY EPGEFEANYA TWRSLIHPDD VLAVEDEVSR HVASGQVFEI EFRMKSKSGQ WQWIMARGRV VEKDEQDHAV RMVGTHVDVT ERKNAEYVAL RAKEAAEAAN RAKSEFLANM SHEIRTPLNG IMGMLQLLQT TSLNHEQLEY SSMAVQSTSR LTSLLSDILD LSRVEAGKMP IRPEVFDLRK KLHQSIDLFA SIALQSGVEL RHHFDDTLPQ HVIGDPLRLQ QVLTNLIGNA FKFTERGFVS VEAYPLPARN ENQLRIFFEV SDSGCGIPDE ALGLLFEPFS QVSQGYTRQY QGAGLGLSIC KRLVGLMGGN MAISSEVGVG TSIYFCVTLD KALKLPAQDS SAQTKTALRP RKILVAEDDE VNLFAVRNLL TKNGHEVVTA HNGHEVLERI MEQDFDLVLM DIQMPEMDGI EATRRIRVTE QATGKKPVPI IAMTAYAMNG DREKLLDKGV DGYVSKPFSI KTLMEVIKEN ANIG
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