Gene Dbac_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1217 
Symbol 
ID8376881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1344332 
End bp1345777 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content63% 
IMG OID645000449 
Productiron-sulfur cluster binding protein 
Protein accessionYP_003157736 
Protein GI256829008 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.49103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAC AGGATCCGCT GCAATACAGG GAACTGGCCG CCAAGGCCGT GCAGGACAAG 
CAGCTGCACA AGGCCCTTGG CAAGCTTCGG GACAAATTCG GCCGTAACGC CGTAAACCTC
TACAATCAGC TCTCGCCGGA GCACGATCCG CGTCAGGACG CCAAGGCCGT GCGGCGCAAG
ATCGTCGACA ATCTGGACGT GGTGCTCGAA ACTCTGGCTG CGAACATCCG GGCCAGGGGC
GGGCATGTCC ACCTGGCCGA GACCGGCGCC GATGCCGTGG AATACTGCCT GGGCGTGGCC
AAACGGTTTC AGGTCCGCCG CGTGGTCAAG GGCAAGTCCA TGCTCAGCGA AGAGATTCAT
CTCAACGACG CGCTTGAAGC CGCCGGCATC GAGACCGTGG AGACGGACCT TGGCGAATAT
ATCGTGCAGC TCAAAGGCGA AGCGCCGTCG CACATCATCG CCCCGGCCAT CCATTACACC
CGCGAGCAGG TCGGCGAACT TTTCGCCGAA AAACTGGGCG AGCCCTTCAC GGATGATCCG
CCGACCCTGA CCGCCATGGC GCGAAAGGCC CTGCGCGAGA AGATGCTGGG CGCCGACATG
GGCATCTCCG GCGGCAACAC CGCCTGCGCC GAGACAGGGC ACGTGACCAT CGTCTCCAAC
GAGGGCAACA TCCGCATGGC CACGACCATG CCGAGGGTGC ACGTCGTGCT GCTCGGCATC
GAGAAGATCG CCGCCACCCT CGAAGACCAC GACATCCTCT TGCGCATGCT GACCCGCGCC
GCCGCCGGGC AGAAGATTTC CACCTATGTC AGCTATGTGG GCGGGCCGCG CCTGGACGAG
GAACCCGACG GACCCGAAGA ATTCCATCTG GTCCTGGTGG ACAACGGCCG CAGCCGCATC
CTGGCCGACC CGGATTTTCG CGAGGTGCTG CATTGCGTAC GCTGCGGCGG ATGTCTGAAT
GTCTGCCCGG TCTACATGGC CATCGGCGGC CACAGTTATG GCTCTCCGTA TTGCGGTCCC
ATCGGCGCGG TCTTCACGCC TCTGACGCAA GGCATCAACA CCTGCCACCA TCTCTGTCAG
GGGGAAACCC TGTGCGGAGC CTGCAAGCAG GTTTGCCCCG TGGACAACGA CCTGCCGCGC
ATGCTCTCGC TGCTGCGTTT TAAATTGGCC AATGGCGATG CACGCTGGAA CGTGCGCCCC
CAGAGCCTGC CCGCAAAGCT GGTTTTCGGG GCCTGGTCGG TGCTCATGCG TCATCGGCGC
ATGTACGACG CGATGAGCCT CTTGGCCGGG TTTTGTCAGA GATTGCTGCC CCGCAAAAAC
GGCTGGATCA GCCGCCTGCC CGGACCGCTT GGCGGCTGGA CCAGAGGCCG CGATTTTCCG
CCTCTGGCCA AGAAAAGCTT TGCCCGGCGC TGGGCGCGTC GGAATACGAC AAGGAGGGAC
GCATGA
 
Protein sequence
MLKQDPLQYR ELAAKAVQDK QLHKALGKLR DKFGRNAVNL YNQLSPEHDP RQDAKAVRRK 
IVDNLDVVLE TLAANIRARG GHVHLAETGA DAVEYCLGVA KRFQVRRVVK GKSMLSEEIH
LNDALEAAGI ETVETDLGEY IVQLKGEAPS HIIAPAIHYT REQVGELFAE KLGEPFTDDP
PTLTAMARKA LREKMLGADM GISGGNTACA ETGHVTIVSN EGNIRMATTM PRVHVVLLGI
EKIAATLEDH DILLRMLTRA AAGQKISTYV SYVGGPRLDE EPDGPEEFHL VLVDNGRSRI
LADPDFREVL HCVRCGGCLN VCPVYMAIGG HSYGSPYCGP IGAVFTPLTQ GINTCHHLCQ
GETLCGACKQ VCPVDNDLPR MLSLLRFKLA NGDARWNVRP QSLPAKLVFG AWSVLMRHRR
MYDAMSLLAG FCQRLLPRKN GWISRLPGPL GGWTRGRDFP PLAKKSFARR WARRNTTRRD
A